RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C CSM4Q08955 156 aa2.65□□□□□ -1.99
WHI3YNL197C AI5_BETAQ9ZZX0 354 aa2.65□□□□□ -1.99
WHI3YNL197C STH1P32597 1359 aa2.65□□□□□ -1.99
WHI3YNL197C TDH2P00358 332 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C MRP1P10662 321 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C TCP1P12612 559 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C HOM6P31116 359 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C YBR096WP38256 230 aa2.64□□□□□ -1.99
WHI3YNL197C RTR1P40084 226 aaPredicted RBP2.64□□□□□ -1.99
WHI3YNL197C RPL10P41805 221 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C GCN20P43535 752 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C HOC1P47124 396 aa2.64□□□□□ -1.99
WHI3YNL197C JHD2P47156 728 aaPredicted RBP2.64□□□□□ -1.99
WHI3YNL197C UFD1P53044 361 aa2.64□□□□□ -1.99
WHI3YNL197C YGR067CP53243 804 aa2.64□□□□□ -1.99
WHI3YNL197C CTF19Q02732 369 aa2.64□□□□□ -1.99
WHI3YNL197C EBS1Q03466 884 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C YDL144CQ07589 356 aa2.64□□□□□ -1.99
WHI3YNL197C RUD3Q12234 484 aaKnown RBP2.64□□□□□ -1.99
WHI3YNL197C ARG80P07249 177 aa2.63□□□□□ -1.99
WHI3YNL197C MATALPHA1P0CY06 175 aa2.63□□□□□ -1.99
WHI3YNL197C HMLALPHA1P0CY07 175 aa2.63□□□□□ -1.99
WHI3YNL197C YCR016WP25617 290 aaKnown RBP2.63□□□□□ -1.99
WHI3YNL197C IMP1P28627 190 aa2.63□□□□□ -1.99
WHI3YNL197C POP8P38208 133 aa2.63□□□□□ -1.99
WHI3YNL197C LDB7P38210 180 aa2.63□□□□□ -1.99
WHI3YNL197C YIL012WP40551 113 aa2.63□□□□□ -1.99
WHI3YNL197C YJR012CP47087 207 aa2.63□□□□□ -1.99
WHI3YNL197C PRP24P49960 444 aaKnown RBP2.63□□□□□ -1.99
WHI3YNL197C YGL118CP53132 145 aa2.63□□□□□ -1.99
WHI3YNL197C KRE6P32486 720 aa2.63□□□□□ -1.99
WHI3YNL197C ALK2P32789 676 aaPredicted RBP2.63□□□□□ -1.99
WHI3YNL197C ASP1P38986 381 aaPredicted RBP2.63□□□□□ -1.99
WHI3YNL197C BDH1P39714 382 aa2.63□□□□□ -1.99
WHI3YNL197C EDC2P40023 145 aaPredicted RBP2.63□□□□□ -1.99
WHI3YNL197C KRE29P40026 464 aa2.63□□□□□ -1.99
WHI3YNL197C MRS2Q01926 470 aa2.63□□□□□ -1.99
WHI3YNL197C SMD1Q02260 146 aaPredicted RBP2.63□□□□□ -1.99
WHI3YNL197C SNF8Q12483 233 aa2.63□□□□□ -1.99
WHI3YNL197C AUS1Q08409 1394 aa2.62□□□□□ -1.99
WHI3YNL197C RPS19AP07280 144 aaKnown RBP2.62□□□□□ -1.99
WHI3YNL197C RPS19BP07281 144 aaPredicted RBP2.62□□□□□ -1.99
WHI3YNL197C COS2P0CX12 379 aa2.62□□□□□ -1.99
WHI3YNL197C COS3P0CX13 379 aa2.62□□□□□ -1.99
WHI3YNL197C MED8P38304 223 aa2.62□□□□□ -1.99
WHI3YNL197C SLX1P38324 304 aa2.62□□□□□ -1.99
WHI3YNL197C MSS2P40990 351 aa2.62□□□□□ -1.99
WHI3YNL197C COS4P43542 379 aa2.62□□□□□ -1.99
WHI3YNL197C OTU1P43558 301 aa2.62□□□□□ -1.99
WHI3YNL197C COQ5P49017 307 aa2.62□□□□□ -1.99
WHI3YNL197C HSH155P49955 971 aaKnown RBP2.62□□□□□ -1.99
WHI3YNL197C COG7P53195 279 aa2.62□□□□□ -1.99
WHI3YNL197C NOP13P53883 403 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
WHI3YNL197C MCH1Q07376 486 aa2.62□□□□□ -1.99
WHI3YNL197C YDL211CQ12121 372 aa2.62□□□□□ -1.99
WHI3YNL197C RPL4AP10664 362 aaKnown RBP2.61□□□□□ -1.99
WHI3YNL197C HEK2P38199 381 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99 RIP-Chip
WHI3YNL197C YHL049CP38722 271 aa2.61□□□□□ -1.99
WHI3YNL197C FRT2P39734 528 aa2.61□□□□□ -1.99
WHI3YNL197C RPL4BP49626 362 aaKnown RBP2.61□□□□□ -1.99
WHI3YNL197C YNL095CP53932 642 aa2.61□□□□□ -1.99
WHI3YNL197C YMR166CQ03829 368 aa2.61□□□□□ -1.99
WHI3YNL197C KRE28Q04431 385 aa2.61□□□□□ -1.99
WHI3YNL197C PLB3Q08108 686 aa2.61□□□□□ -1.99
WHI3YNL197C ATG5Q12380 294 aa2.61□□□□□ -1.99
WHI3YNL197C FUS3P16892 353 aaKnown RBP2.61□□□□□ -1.99
WHI3YNL197C PHO80P20052 293 aa2.61□□□□□ -1.99
WHI3YNL197C RNA15P25299 296 aaPredicted RBP2.61□□□□□ -1.99
WHI3YNL197C HMT1P38074 348 aa2.61□□□□□ -1.99
WHI3YNL197C MRPS9P38120 278 aa2.61□□□□□ -1.99
WHI3YNL197C YHL044WP38727 235 aa2.61□□□□□ -1.99
WHI3YNL197C YIL054WP40524 105 aa2.61□□□□□ -1.99
WHI3YNL197C ARC18Q05933 178 aaKnown RBP2.61□□□□□ -1.99
WHI3YNL197C COQ10Q08058 207 aa2.61□□□□□ -1.99
WHI3YNL197C CAT2P32796 670 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C BMH2P34730 273 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C JEN1P36035 616 aa2.6□□□□□ -1.99
WHI3YNL197C BFR1P38934 470 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99 RIP-Chip
WHI3YNL197C SYS1P41544 203 aa2.6□□□□□ -1.99
WHI3YNL197C YJR079WP47126 109 aa2.6□□□□□ -1.99
WHI3YNL197C CAX4P53223 239 aa2.6□□□□□ -1.99
WHI3YNL197C OSH6Q02201 448 aa2.6□□□□□ -1.99
WHI3YNL197C YPL119C-AQ3E751 87 aa2.6□□□□□ -1.99
WHI3YNL197C RHO1P06780 209 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C CKA2P19454 339 aa2.6□□□□□ -1.99
WHI3YNL197C PRE7P23724 241 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C TPS2P31688 896 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C YBL081WP38180 368 aaKnown RBP2.6□□□□□ -1.99
WHI3YNL197C AVT6P40074 448 aa2.6□□□□□ -1.99
WHI3YNL197C YFL012WP43580 148 aa2.6□□□□□ -1.99
WHI3YNL197C MRPL50P53724 139 aa2.6□□□□□ -1.99
WHI3YNL197C SPO77Q06134 477 aa2.6□□□□□ -1.99
WHI3YNL197C YPL264CQ08980 353 aa2.6□□□□□ -1.99
WHI3YNL197C YMR316C-AI2HB70 103 aa2.59□□□□□ -2
WHI3YNL197C CPT1P17898 393 aa2.59□□□□□ -2
WHI3YNL197C OSM1P21375 501 aaKnown RBP2.59□□□□□ -2
WHI3YNL197C CAM1P29547 415 aaKnown RBP2.59□□□□□ -2
WHI3YNL197C NTG1P31378 399 aa2.59□□□□□ -2
WHI3YNL197C CSG2P35206 410 aa2.59□□□□□ -2
WHI3YNL197C RPC17P47076 161 aa2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms