RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C NIT2P47016 307 aa2.19□□□□□ -2.06
SGS1YMR190C NUP57P48837 541 aa2.19□□□□□ -2.06
SGS1YMR190C MRH4P53166 561 aa2.19□□□□□ -2.06
SGS1YMR190C RSM27P53305 110 aa2.19□□□□□ -2.06
SGS1YMR190C PHO92Q06390 306 aa2.19□□□□□ -2.06
SGS1YMR190C PIN3Q06449 215 aa2.19□□□□□ -2.06
SGS1YMR190C SWA2Q06677 668 aa2.19□□□□□ -2.06
SGS1YMR190C GRE1Q08969 168 aa2.19□□□□□ -2.06
SGS1YMR190C LSO1Q3E827 93 aa2.19□□□□□ -2.06
SGS1YMR190C YBR126W-AQ8TGU7 68 aa2.19□□□□□ -2.06
SGS1YMR190C TRA1P38811 3744 aa2.19□□□□□ -2.06
SGS1YMR190C HEM13P11353 328 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C ZWF1P11412 505 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C PRE7P23724 241 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C SNC1P31109 117 aa2.19□□□□□ -2.06
SGS1YMR190C SUR1P33300 382 aa2.19□□□□□ -2.06
SGS1YMR190C PTH1P38876 190 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C PZF1P39933 429 aa2.19□□□□□ -2.06
SGS1YMR190C YFL066CP43538 392 aa2.19□□□□□ -2.06
SGS1YMR190C TY4A-JP47023 414 aa2.19□□□□□ -2.06
SGS1YMR190C XPT1P47165 209 aa2.19□□□□□ -2.06
SGS1YMR190C CTL1Q03220 320 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C HAS1Q03532 505 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C RQC1Q05468 723 aaKnown RBP2.19□□□□□ -2.06
SGS1YMR190C YPR098CQ06089 161 aa2.19□□□□□ -2.06
SGS1YMR190C NEJ1Q06148 342 aa2.19□□□□□ -2.06
SGS1YMR190C TDA6Q06466 467 aa2.19□□□□□ -2.06
SGS1YMR190C PRP28P23394 588 aa2.18□□□□□ -2.06
SGS1YMR190C SED4P25365 1065 aa2.18□□□□□ -2.06
SGS1YMR190C YCR100CP25606 316 aa2.18□□□□□ -2.06
SGS1YMR190C FLO10P36170 1169 aa2.18□□□□□ -2.06
SGS1YMR190C ZTA1P38230 334 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C NSG1P38837 291 aa2.18□□□□□ -2.06
SGS1YMR190C CTF8P38877 133 aa2.18□□□□□ -2.06
SGS1YMR190C BNA6P43619 295 aa2.18□□□□□ -2.06
SGS1YMR190C YAE1P47118 141 aaPredicted RBP2.18□□□□□ -2.06
SGS1YMR190C SAM37P50110 327 aa2.18□□□□□ -2.06
SGS1YMR190C SAM50P53969 484 aa2.18□□□□□ -2.06
SGS1YMR190C OST6Q03723 332 aa2.18□□□□□ -2.06
SGS1YMR190C YLR173WQ06247 608 aa2.18□□□□□ -2.06
SGS1YMR190C ERF2Q06551 359 aa2.18□□□□□ -2.06
SGS1YMR190C UIP4Q08926 304 aa2.18□□□□□ -2.06
SGS1YMR190C SET6Q12529 373 aa2.18□□□□□ -2.06
SGS1YMR190C YCR075W-AQ3E830 75 aa2.18□□□□□ -2.06
SGS1YMR190C CSF1Q12150 2958 aa2.18□□□□□ -2.06
SGS1YMR190C QCR7P00128 127 aa2.18□□□□□ -2.06
SGS1YMR190C RFA1P22336 621 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C ROX3P25046 220 aa2.18□□□□□ -2.06
SGS1YMR190C NRP1P32770 719 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SGS1YMR190C FAT1P38225 669 aa2.18□□□□□ -2.06
SGS1YMR190C MBA1P38300 278 aa2.18□□□□□ -2.06
SGS1YMR190C AIM10P39965 576 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C BUR6P40096 142 aa2.18□□□□□ -2.06
SGS1YMR190C RPA14P50106 137 aa2.18□□□□□ -2.06
SGS1YMR190C YDC1Q02896 317 aa2.18□□□□□ -2.06
SGS1YMR190C YLR281CQ05863 155 aa2.18□□□□□ -2.06
SGS1YMR190C DCI1Q08558 271 aa2.18□□□□□ -2.06
SGS1YMR190C YDL109CQ12103 647 aa2.18□□□□□ -2.06
SGS1YMR190C MCP1Q12106 302 aa2.18□□□□□ -2.06
SGS1YMR190C DCP1Q12517 231 aaPredicted RBP2.18□□□□□ -2.06
SGS1YMR190C SAC7P17121 654 aa2.18□□□□□ -2.06
SGS1YMR190C RPS0AP32905 252 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C RIB7P33312 244 aa2.18□□□□□ -2.06
SGS1YMR190C SHM2P37291 469 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C IMD3P50095 523 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C CWC23P52868 283 aaPredicted RBP2.18□□□□□ -2.06
SGS1YMR190C TPN1P53099 579 aa2.18□□□□□ -2.06
SGS1YMR190C VBA4Q04602 768 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C MDM36Q06820 579 aa2.18□□□□□ -2.06
SGS1YMR190C RBD2Q12270 262 aa2.18□□□□□ -2.06
SGS1YMR190C IES3Q12345 250 aa2.18□□□□□ -2.06
SGS1YMR190C YOL162WP0CF19 215 aa2.18□□□□□ -2.06
SGS1YMR190C IDP1P21954 428 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C MTC2P34246 357 aa2.18□□□□□ -2.06
SGS1YMR190C ANR2P36090 516 aaPredicted RBP2.18□□□□□ -2.06
SGS1YMR190C AIM20P40451 204 aa2.18□□□□□ -2.06
SGS1YMR190C NCA3P46955 337 aa2.18□□□□□ -2.06
SGS1YMR190C BAT2P47176 376 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C TOS2P50078 622 aa2.18□□□□□ -2.06
SGS1YMR190C UBC13P52490 153 aa2.18□□□□□ -2.06
SGS1YMR190C YIP5P53108 310 aa2.18□□□□□ -2.06
SGS1YMR190C TNA1P53322 534 aa2.18□□□□□ -2.06
SGS1YMR190C NUP49Q02199 472 aa2.18□□□□□ -2.06
SGS1YMR190C MRL1Q06815 381 aa2.18□□□□□ -2.06
SGS1YMR190C SYO1Q07395 620 aa2.18□□□□□ -2.06
SGS1YMR190C YDL086WQ07505 273 aa2.18□□□□□ -2.06
SGS1YMR190C RDL2Q08742 149 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C SOG2Q08817 791 aa2.18□□□□□ -2.06
SGS1YMR190C FRE6Q12473 712 aa2.18□□□□□ -2.06
SGS1YMR190C RPS21BQ3E754 87 aaKnown RBP2.18□□□□□ -2.06
SGS1YMR190C PHO4P07270 312 aaKnown RBP2.17□□□□□ -2.06
SGS1YMR190C TOM40P23644 387 aaKnown RBP2.17□□□□□ -2.06
SGS1YMR190C NDC1P32500 655 aa2.17□□□□□ -2.06
SGS1YMR190C TOD6P34219 525 aa2.17□□□□□ -2.06
SGS1YMR190C YHR219WP38900 624 aa2.17□□□□□ -2.06
SGS1YMR190C RTT105P40063 208 aa2.17□□□□□ -2.06
SGS1YMR190C SWP82P43554 623 aa2.17□□□□□ -2.06
SGS1YMR190C CIN2P46670 268 aa2.17□□□□□ -2.06
SGS1YMR190C IMO32P53219 342 aa2.17□□□□□ -2.06
SGS1YMR190C ORM1P53224 222 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms