RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeast

Gene VPS20, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS20	YMR077C	RPL18B	P0CX50	186 aa	Known RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	FBA1	P14540	359 aa	Known RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	GDH2	P33327	1092 aa	Known RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	YBR220C	P38318	560 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	LIN1	P38852	340 aa	Predicted RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	GDS1	P41913	522 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	PDR16	P53860	351 aa	Known RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	YML018C	Q03730	393 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	TAZ1	Q06510	381 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	PBP4	Q07362	185 aa	Known RBP	0.71	□□□□□ -2.3
VPS20	YMR077C	APC9	Q12107	265 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	NFI1	Q12216	726 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	YPR064W	Q12492	139 aa		0.71	□□□□□ -2.3
VPS20	YMR077C	FPR1	P20081	114 aa	Known RBP	0.7	□□□□□ -2.3
VPS20	YMR077C	SAM4	Q08985	325 aa	Known RBP	0.7	□□□□□ -2.3
VPS20	YMR077C	SAS5	Q99314	248 aa		0.7	□□□□□ -2.3
VPS20	YMR077C	RAS2	P01120	322 aa	Known RBP	0.69	□□□□□ -2.3
VPS20	YMR077C	RPL31A	P0C2H8	113 aa	Known RBP	0.69	□□□□□ -2.3
VPS20	YMR077C	GAL3	P13045	520 aa		0.69	□□□□□ -2.3
VPS20	YMR077C	MPP10	P47083	593 aa	Known RBP	0.69	□□□□□ -2.3
VPS20	YMR077C	AAH1	P53909	347 aa		0.69	□□□□□ -2.3
VPS20	YMR077C	TRM44	Q02648	567 aa	Known RBP	0.69	□□□□□ -2.3
VPS20	YMR077C	YMR111C	Q04461	462 aa	Predicted RBP	0.69	□□□□□ -2.3
VPS20	YMR077C	YOR114W	Q12219	294 aa		0.69	□□□□□ -2.3
VPS20	YMR077C	YPR1	Q12458	312 aa		0.69	□□□□□ -2.3
VPS20	YMR077C	MDH2	P22133	377 aa		0.68	□□□□□ -2.3
VPS20	YMR077C	PPH21	P23594	369 aa		0.68	□□□□□ -2.3
VPS20	YMR077C	ARN2	P38724	620 aa		0.68	□□□□□ -2.3
VPS20	YMR077C	VTC1	P40046	129 aa	RIP-Chip data	0.68	□□□□□ -2.3	not detected
VPS20	YMR077C	DPP1	Q05521	289 aa		0.68	□□□□□ -2.3
VPS20	YMR077C	TEM1	P38987	245 aa		0.67	□□□□□ -2.3
VPS20	YMR077C	PSY3	Q12318	242 aa		0.67	□□□□□ -2.3
VPS20	YMR077C	POX1	P13711	748 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	SCL1	P21243	252 aa	Known RBP	0.66	□□□□□ -2.3
VPS20	YMR077C	RNP1	P32385	249 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	SUA5	P32579	426 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	RPS0A	P32905	252 aa	Known RBP	0.66	□□□□□ -2.3
VPS20	YMR077C	FET3	P38993	636 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	FMP41	P53889	259 aa	Known RBP	0.66	□□□□□ -2.3
VPS20	YMR077C	YMR209C	Q03648	457 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	RCF1	Q03713	159 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	GEP5	Q12393	293 aa		0.66	□□□□□ -2.3
VPS20	YMR077C	YER188C-A	P0C0V2	99 aa		0.65	□□□□□ -2.31
VPS20	YMR077C	SWD2	P36104	329 aa	Predicted RBP	0.65	□□□□□ -2.31
VPS20	YMR077C	AIM20	P40451	204 aa		0.65	□□□□□ -2.31
VPS20	YMR077C	BMT5	P40493	336 aa		0.65	□□□□□ -2.31
VPS20	YMR077C	YIA6	P40556	373 aa		0.65	□□□□□ -2.31
VPS20	YMR077C	YMR316C-A	I2HB70	103 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	PEX4	P29340	183 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	SPT4	P32914	102 aa	Predicted RBP	0.64	□□□□□ -2.31
VPS20	YMR077C	SWC5	P38326	303 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	NIF3	P53081	288 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	VPS60	Q03390	229 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	PAA1	Q12447	191 aa	Known RBP	0.64	□□□□□ -2.31
VPS20	YMR077C	UBR2	Q07963	1872 aa		0.64	□□□□□ -2.31
VPS20	YMR077C	PET494	P07390	489 aa	Predicted RBP	0.63	□□□□□ -2.31
VPS20	YMR077C	SMI1	P32566	505 aa		0.63	□□□□□ -2.31
VPS20	YMR077C	YKL063C	P35725	167 aa		0.63	□□□□□ -2.31
VPS20	YMR077C	RPC37	P36121	282 aa		0.63	□□□□□ -2.31
VPS20	YMR077C	HMT1	P38074	348 aa		0.63	□□□□□ -2.31
VPS20	YMR077C	POM33	Q12164	279 aa		0.63	□□□□□ -2.31
VPS20	YMR077C	CDC37	P06101	506 aa	Known RBP	0.62	□□□□□ -2.31
VPS20	YMR077C	VMA2	P16140	517 aa	Known RBP	0.62	□□□□□ -2.31
VPS20	YMR077C	RPL5	P26321	297 aa	Known RBP	0.62	□□□□□ -2.31
VPS20	YMR077C	CAM1	P29547	415 aa	Known RBP	0.62	□□□□□ -2.31
VPS20	YMR077C	YBR219C	P38317	127 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	DOG1	P38774	246 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	END3	P39013	349 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	NAS2	P40555	220 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	MDM34	P53083	459 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	ASI3	P53983	676 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	YLR297W	Q05899	129 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	ASR1	Q06834	288 aa		0.62	□□□□□ -2.31
VPS20	YMR077C	CAR2	P07991	424 aa	Known RBP	0.61	□□□□□ -2.31
VPS20	YMR077C	MAL32	P38158	584 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	AGX1	P43567	385 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	YJL028W	P47062	111 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	COX16	P47081	118 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	MAL12	P53341	584 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	YPL077C	Q02831	240 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	LOA1	Q06508	300 aa		0.61	□□□□□ -2.31
VPS20	YMR077C	RPL2A	P0CX45	254 aa	Known RBP	0.6	□□□□□ -2.31
VPS20	YMR077C	RPL2B	P0CX46	254 aa	Known RBP	0.6	□□□□□ -2.31
VPS20	YMR077C	MSS116	P15424	664 aa	Known RBP	0.6	□□□□□ -2.31
VPS20	YMR077C	SHC1	P39000	512 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	PRM10	P42946	383 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	RIB4	P50861	169 aa	Predicted RBP	0.6	□□□□□ -2.31
VPS20	YMR077C	ERG25	P53045	309 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	SDC1	Q03323	175 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	SIA1	Q12212	622 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	PST1	Q12355	444 aa		0.6	□□□□□ -2.31
VPS20	YMR077C	ATP6	P00854	259 aa		0.59	□□□□□ -2.31
VPS20	YMR077C	IBA57	P47158	497 aa		0.59	□□□□□ -2.31
VPS20	YMR077C	DBP6	P53734	629 aa	Known RBP	0.59	□□□□□ -2.31
VPS20	YMR077C	TAF9	Q05027	157 aa		0.59	□□□□□ -2.31
VPS20	YMR077C	CSI2	Q08054	341 aa		0.59	□□□□□ -2.31
VPS20	YMR077C	RPS3	P05750	240 aa	Known RBP	0.58	□□□□□ -2.32
VPS20	YMR077C	DSF1	P0CX08	502 aa		0.58	□□□□□ -2.32
VPS20	YMR077C	YNR073C	P0CX09	502 aa		0.58	□□□□□ -2.32
VPS20	YMR077C	UIP5	P36137	443 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms