RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W TPN1P53099 579 aa2.12□□□□□ -2.07
SMD2YLR275W COG7P53195 279 aa2.12□□□□□ -2.07
SMD2YLR275W SSU72P53538 206 aaPredicted RBP2.12□□□□□ -2.07
SMD2YLR275W MRS2Q01926 470 aa2.12□□□□□ -2.07
SMD2YLR275W SPP2Q02521 185 aa2.12□□□□□ -2.07
SMD2YLR275W TVP15Q03860 143 aa2.12□□□□□ -2.07
SMD2YLR275W TAF9Q05027 157 aa2.12□□□□□ -2.07
SMD2YLR275W TDH1P00360 332 aaKnown RBP2.11□□□□□ -2.07
SMD2YLR275W RRT12P25381 491 aa2.11□□□□□ -2.07
SMD2YLR275W FMP33P46998 180 aa2.11□□□□□ -2.07
SMD2YLR275W PIR5P46999 287 aa2.11□□□□□ -2.07
SMD2YLR275W PET494P07390 489 aaPredicted RBP2.1□□□□□ -2.07
SMD2YLR275W OSM1P21375 501 aaKnown RBP2.1□□□□□ -2.07
SMD2YLR275W PEX31P53203 462 aa2.1□□□□□ -2.07
SMD2YLR275W SWT21P53873 357 aaPredicted RBP2.1□□□□□ -2.07
SMD2YLR275W VPS60Q03390 229 aa2.1□□□□□ -2.07
SMD2YLR275W VBA1Q04301 562 aa2.1□□□□□ -2.07
SMD2YLR275W YLL007CQ07799 665 aa2.1□□□□□ -2.07
SMD2YLR275W YMR316C-AI2HB70 103 aa2.09□□□□□ -2.07
SMD2YLR275W COT1P32798 439 aa2.09□□□□□ -2.07
SMD2YLR275W CLB6P32943 380 aa2.09□□□□□ -2.07
SMD2YLR275W RIB7P33312 244 aa2.09□□□□□ -2.07
SMD2YLR275W MRPL37P36532 105 aa2.09□□□□□ -2.07
SMD2YLR275W PHO89P38361 574 aa2.09□□□□□ -2.07
SMD2YLR275W RCY1P39531 840 aa2.09□□□□□ -2.07
SMD2YLR275W IBA57P47158 497 aa2.09□□□□□ -2.07
SMD2YLR275W LSB1P53281 241 aa2.09□□□□□ -2.07
SMD2YLR275W SFH1Q06168 426 aa2.09□□□□□ -2.07
SMD2YLR275W GMC2Q06201 188 aa2.09□□□□□ -2.07
SMD2YLR275W PLB3Q08108 686 aa2.09□□□□□ -2.07
SMD2YLR275W PER33Q12144 273 aa2.09□□□□□ -2.07
SMD2YLR275W ATG5Q12380 294 aa2.09□□□□□ -2.07
SMD2YLR275W SSK22P25390 1331 aaPredicted RBP2.09□□□□□ -2.08
SMD2YLR275W RPL24AP04449 155 aaKnown RBP2.08□□□□□ -2.08
SMD2YLR275W RPS3P05750 240 aaKnown RBP2.08□□□□□ -2.08
SMD2YLR275W ATG15P25641 520 aa2.08□□□□□ -2.08
SMD2YLR275W KRE6P32486 720 aa2.08□□□□□ -2.08
SMD2YLR275W SPL2P38839 148 aa2.08□□□□□ -2.08
SMD2YLR275W RPE1P46969 238 aa2.08□□□□□ -2.08
SMD2YLR275W YJR141WP47172 347 aaPredicted RBP2.08□□□□□ -2.08
SMD2YLR275W PAN1P32521 1480 aa2.07□□□□□ -2.08
SMD2YLR275W MET16P18408 261 aaPredicted RBP2.07□□□□□ -2.08
SMD2YLR275W CAT2P32796 670 aaKnown RBP2.07□□□□□ -2.08
SMD2YLR275W POP8P38208 133 aa2.07□□□□□ -2.08
SMD2YLR275W SUR2P38992 349 aa2.07□□□□□ -2.08
SMD2YLR275W TAD2P47058 250 aa2.07□□□□□ -2.08
SMD2YLR275W OST3P48439 350 aa2.07□□□□□ -2.08
SMD2YLR275W DSK2P48510 373 aa2.07□□□□□ -2.08
SMD2YLR275W KAP114P53067 1004 aa2.07□□□□□ -2.08
SMD2YLR275W TRM44Q02648 567 aaKnown RBP2.07□□□□□ -2.08
SMD2YLR275W SEC10Q06245 871 aa2.07□□□□□ -2.08
SMD2YLR275W RDS3Q06835 107 aaPredicted RBP2.07□□□□□ -2.08
SMD2YLR275W RRP36Q12481 300 aaPredicted RBP2.07□□□□□ -2.08
SMD2YLR275W NUP157P40064 1391 aaKnown RBP2.07□□□□□ -2.08
SMD2YLR275W YAL064W-BO13512 126 aa2.06□□□□□ -2.08
SMD2YLR275W POF1P25576 258 aa2.06□□□□□ -2.08
SMD2YLR275W PEX3P28795 441 aa2.06□□□□□ -2.08
SMD2YLR275W CAM1P29547 415 aaKnown RBP2.06□□□□□ -2.08
SMD2YLR275W ERG2P32352 222 aa2.06□□□□□ -2.08
SMD2YLR275W HSM3P38348 480 aa2.06□□□□□ -2.08
SMD2YLR275W PET100P38958 111 aa2.06□□□□□ -2.08
SMD2YLR275W TIM21P53220 239 aa2.06□□□□□ -2.08
SMD2YLR275W MPP6P53725 186 aaPredicted RBP2.06□□□□□ -2.08
SMD2YLR275W CTR3Q06686 241 aa2.06□□□□□ -2.08
SMD2YLR275W VPS68Q12016 184 aa2.06□□□□□ -2.08
SMD2YLR275W YOR283WQ12040 230 aaKnown RBP2.06□□□□□ -2.08
SMD2YLR275W YPL150WQ12152 901 aa2.06□□□□□ -2.08
SMD2YLR275W AGC1Q12482 902 aa2.06□□□□□ -2.08
SMD2YLR275W HIS1P00498 297 aaKnown RBP2.05□□□□□ -2.08
SMD2YLR275W RPL26AP05743 127 aaKnown RBP2.05□□□□□ -2.08
SMD2YLR275W COY1P34237 679 aa2.05□□□□□ -2.08
SMD2YLR275W SHC1P39000 512 aa2.05□□□□□ -2.08
SMD2YLR275W COA1P40452 197 aa2.05□□□□□ -2.08
SMD2YLR275W RPL26BP53221 127 aaKnown RBP2.05□□□□□ -2.08
SMD2YLR275W FMP41P53889 259 aaKnown RBP2.05□□□□□ -2.08
SMD2YLR275W CDC14Q00684 551 aa2.05□□□□□ -2.08
SMD2YLR275W FCF1Q05498 189 aaPredicted RBP2.05□□□□□ -2.08
SMD2YLR275W ARV1Q06541 321 aa2.05□□□□□ -2.08
SMD2YLR275W YOS9Q99220 542 aa2.05□□□□□ -2.08
SMD2YLR275W YHI9P38765 294 aa2.04□□□□□ -2.08
SMD2YLR275W SER33P40510 469 aa2.04□□□□□ -2.08
SMD2YLR275W YJL118WP47022 219 aa2.04□□□□□ -2.08
SMD2YLR275W MNT4P53745 580 aa2.04□□□□□ -2.08
SMD2YLR275W SDC1Q03323 175 aa2.04□□□□□ -2.08
SMD2YLR275W CGI121Q03705 181 aaKnown RBP2.04□□□□□ -2.08
SMD2YLR275W COX20Q04935 205 aa2.04□□□□□ -2.08
SMD2YLR275W KAP95Q06142 861 aaKnown RBP2.04□□□□□ -2.08
SMD2YLR275W LOA1Q06508 300 aa2.04□□□□□ -2.08
SMD2YLR275W TY3A-GQ12173 290 aa2.04□□□□□ -2.08
SMD2YLR275W TY3A-IQ99219 290 aa2.04□□□□□ -2.08
SMD2YLR275W YEL009C-AA0A023PZF2 135 aa2.03□□□□□ -2.08
SMD2YLR275W RPP0P05317 312 aaKnown RBP2.03□□□□□ -2.08
SMD2YLR275W RPL4AP10664 362 aaKnown RBP2.03□□□□□ -2.08
SMD2YLR275W NPT1P39683 429 aaKnown RBP2.03□□□□□ -2.08
SMD2YLR275W DDI1P40087 428 aa2.03□□□□□ -2.08
SMD2YLR275W YJR146WP47174 117 aa2.03□□□□□ -2.08
SMD2YLR275W RPL4BP49626 362 aaKnown RBP2.03□□□□□ -2.08
SMD2YLR275W OST6Q03723 332 aa2.03□□□□□ -2.08
SMD2YLR275W ATC1Q04005 294 aa2.03□□□□□ -2.08
SMD2YLR275W MYO5Q04439 1219 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms