RNA–Protein interactions for RNA: YLR106C

MDN1, Transcript of Huge dynein-related AAA-type ATPase (midasin), yeast

Gene MDN1, Length 14,733 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDN1	YLR106C	TIM12	P32830	109 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	YPT1	P01123	206 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	RPS18A	P0CX55	146 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	RPS18B	P0CX56	146 aa	Predicted RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	FMP46	P36141	133 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	VMA7	P39111	118 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	COX20	Q04935	205 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	CAR2	P07991	424 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	SRY1	P36007	326 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	AUR1	P36107	401 aa	Predicted RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	IRC24	P40580	263 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	BRR6	P53062	197 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	ACS1	Q01574	713 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	SPR28	Q04921	423 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	YDL211C	Q12121	372 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	YLR146W-A	Q2V2P1	62 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	ZRC1	P20107	442 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	CSL4	P53859	292 aa	Predicted RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	UTP15	Q04305	513 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	RDL2	Q08742	149 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	NIP7	Q08962	181 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	YPR015C	Q12531	247 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	ERG3	P32353	365 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	ATG40	Q99325	256 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	YPK2	P18961	677 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	PPG1	P32838	368 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	COX15	P40086	486 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	PFA4	Q12006	378 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	DFG16	Q99234	619 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	URA6	P15700	204 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	SNF5	P18480	905 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	PUP1	P25043	261 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	AIM29	P36154	155 aa		3.13	□□□□□ -1.91
MDN1	YLR106C	PAC1	P39946	494 aa	Known RBP	3.13	□□□□□ -1.91
MDN1	YLR106C	PHO4	P07270	312 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	MKK2	P32491	506 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	BAP3	P41815	604 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CDA2	Q06703	312 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YPL272C	Q08984	517 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	HXT16	P47185	567 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	AAH1	P53909	347 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CDC36	P06100	191 aa	Predicted RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	RSM10	Q03201	203 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	SOD2	P00447	233 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	GSH1	P32477	678 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YBR292C	P38357	123 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	LNP1	P38878	278 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	RBG2	P53295	368 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	PFA5	Q03289	374 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	RTT103	Q05543	409 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	GAS1	P22146	559 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	DBP2	P24783	546 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	TIM17	P39515	158 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	PTI1	P39927	425 aa	Predicted RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	CDC40	P40968	455 aa	Predicted RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	CIS3	P47001	227 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	AVT4	P50944	713 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	MAL12	P53341	584 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	GRX5	Q02784	150 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CRT10	Q08226	957 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	RAX1	Q08760	435 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	PMT2	P31382	759 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	SPG5	P42933	373 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	ERV29	P53337	310 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YOL024W	Q08172	172 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	ODC2	Q99297	307 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	MEK1	P24719	497 aa	Predicted RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	PRE4	P30657	266 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	ERJ5	P43613	295 aa	Predicted RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	AAT1	Q01802	451 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CGI121	Q03705	181 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	PAM18	Q07914	168 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CDC7	P06243	507 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YKL075C	P36083	450 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	LSM8	P47093	109 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	SEH1	P53011	349 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	YDR387C	Q04162	555 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	AKR2	Q12013	749 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	RPP2A	P05319	106 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	YCR102C	P25608	368 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	SPT14	P32363	452 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YEF1	P32622	495 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	ECM31	P38122	312 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	PCL6	P40038	420 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	CDH1	P53197	566 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
MDN1	YLR106C	HXT14	P42833	540 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	FYV7	Q12247	151 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	PDC2	P32896	925 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	SRL3	P36167	246 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	SRO77	P38163	1010 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YFH1	Q07540	174 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	MCP1	Q12106	302 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	RPC40	P07703	335 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	CKA1	P15790	372 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	THI2	P38141	450 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	YER010C	P40011	234 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	GPI14	P47088	403 aa	Known RBP	3.12	□□□□□ -1.91
MDN1	YLR106C	LIP2	Q06005	328 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	MRX9	Q07349	420 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms