RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C MED7Q08278 222 aa2.15□□□□□ -2.06
VPS13YLL040C PEX27Q08580 376 aa2.15□□□□□ -2.06
VPS13YLL040C SSA3P09435 649 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C RPL31AP0C2H8 113 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C RPL31BP0C2H9 113 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C NHP6AP11632 93 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C SCO1P23833 295 aa2.15□□□□□ -2.07
VPS13YLL040C NTH1P32356 751 aa2.15□□□□□ -2.07
VPS13YLL040C ERG24P32462 438 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C DRE2P36152 348 aa2.15□□□□□ -2.07
VPS13YLL040C SEA4P38164 1038 aa2.15□□□□□ -2.07
VPS13YLL040C GWT1P47026 490 aa2.15□□□□□ -2.07
VPS13YLL040C RMD9P53140 646 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C FMP41P53889 259 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C PRP11Q07350 266 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C HEM25Q07534 307 aa2.15□□□□□ -2.07
VPS13YLL040C YPS3Q12303 508 aa2.15□□□□□ -2.07
VPS13YLL040C VMA3P25515 160 aa2.15□□□□□ -2.07
VPS13YLL040C LAC1P28496 418 aa2.15□□□□□ -2.07
VPS13YLL040C AFR1P33304 620 aa2.15□□□□□ -2.07
VPS13YLL040C PPZ2P33329 710 aa2.15□□□□□ -2.07
VPS13YLL040C ROT1Q03691 256 aa2.15□□□□□ -2.07
VPS13YLL040C YML018CQ03730 393 aa2.15□□□□□ -2.07
VPS13YLL040C YLR030WQ07967 263 aa2.15□□□□□ -2.07
VPS13YLL040C YPR011CQ12251 326 aa2.15□□□□□ -2.07
VPS13YLL040C GCD1P09032 578 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C PET9P18239 318 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C TRX3P25372 127 aa2.15□□□□□ -2.07
VPS13YLL040C SRP21P32342 167 aa2.15□□□□□ -2.07
VPS13YLL040C RTC3P38804 111 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C FAU1P40099 211 aa2.15□□□□□ -2.07
VPS13YLL040C RFC4P40339 323 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C AIM25P47140 327 aa2.15□□□□□ -2.07
VPS13YLL040C DOC1P53068 250 aa2.15□□□□□ -2.07
VPS13YLL040C YPR147CQ06522 304 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C ERD1P16151 362 aa2.15□□□□□ -2.07
VPS13YLL040C SUA5P32579 426 aa2.15□□□□□ -2.07
VPS13YLL040C YLR152CP54072 576 aa2.15□□□□□ -2.07
VPS13YLL040C AVO2Q04749 426 aa2.15□□□□□ -2.07
VPS13YLL040C MCT1Q12283 360 aa2.15□□□□□ -2.07
VPS13YLL040C ADH3P07246 375 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C GAP1P19145 602 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C PUT3P25502 979 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C FUN26P31381 517 aa2.15□□□□□ -2.07
VPS13YLL040C LDH1P38139 375 aa2.15□□□□□ -2.07
VPS13YLL040C BIO3P50277 480 aa2.15□□□□□ -2.07
VPS13YLL040C SNO4Q04902 237 aa2.15□□□□□ -2.07
VPS13YLL040C YPR174CQ06616 221 aaPredicted RBP2.15□□□□□ -2.07
VPS13YLL040C HSP33Q08914 237 aaKnown RBP2.15□□□□□ -2.07
VPS13YLL040C HSP32Q08992 237 aa2.15□□□□□ -2.07
VPS13YLL040C SRL2Q12020 392 aa2.15□□□□□ -2.07
VPS13YLL040C GLK1P17709 500 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C PAN3P36102 679 aaPredicted RBP2.14□□□□□ -2.07
VPS13YLL040C LAS21P40367 830 aa2.14□□□□□ -2.07
VPS13YLL040C YGR042WP53227 271 aa2.14□□□□□ -2.07
VPS13YLL040C TRM112P53738 135 aaPredicted RBP2.14□□□□□ -2.07
VPS13YLL040C YMR178WQ03219 274 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C Q0142Q9ZZW4 58 aa2.14□□□□□ -2.07
VPS13YLL040C YCL002CP25565 263 aa2.14□□□□□ -2.07
VPS13YLL040C SLM6P38343 150 aa2.14□□□□□ -2.07
VPS13YLL040C BOL3P39724 118 aa2.14□□□□□ -2.07
VPS13YLL040C PPT1P53043 513 aa2.14□□□□□ -2.07
VPS13YLL040C EST3Q03096 181 aa2.14□□□□□ -2.07
VPS13YLL040C YCT1Q12235 531 aa2.14□□□□□ -2.07
VPS13YLL040C DST1P07273 309 aa2.14□□□□□ -2.07
VPS13YLL040C ATP5P09457 212 aa2.14□□□□□ -2.07
VPS13YLL040C SAC7P17121 654 aa2.14□□□□□ -2.07
VPS13YLL040C YBL010CP32788 280 aa2.14□□□□□ -2.07
VPS13YLL040C YUH1P35127 236 aa2.14□□□□□ -2.07
VPS13YLL040C CHS7P38843 316 aa2.14□□□□□ -2.07
VPS13YLL040C RRD1P40454 393 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C BUD8P41698 603 aa2.14□□□□□ -2.07
VPS13YLL040C TMA23Q03525 211 aa2.14□□□□□ -2.07
VPS13YLL040C TAZ1Q06510 381 aa2.14□□□□□ -2.07
VPS13YLL040C YOR378WQ08902 515 aa2.14□□□□□ -2.07
VPS13YLL040C DCN1Q12395 269 aa2.14□□□□□ -2.07
VPS13YLL040C MDH2P22133 377 aa2.14□□□□□ -2.07
VPS13YLL040C FMP52P40008 231 aa2.14□□□□□ -2.07
VPS13YLL040C LSM4P40070 187 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C DLS1P40366 167 aa2.14□□□□□ -2.07
VPS13YLL040C VPS73P53142 486 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C MSC1Q03104 513 aa2.14□□□□□ -2.07
VPS13YLL040C YDR286CQ05530 114 aa2.14□□□□□ -2.07
VPS13YLL040C YDL177CQ12257 170 aa2.14□□□□□ -2.07
VPS13YLL040C RPP1AP05318 106 aaPredicted RBP2.14□□□□□ -2.07
VPS13YLL040C AIM17P23180 465 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C DAL3P32459 195 aa2.14□□□□□ -2.07
VPS13YLL040C LYP1P32487 611 aa2.14□□□□□ -2.07
VPS13YLL040C PMU1P36069 295 aa2.14□□□□□ -2.07
VPS13YLL040C CCS1P40202 249 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C SCP1Q08873 200 aa2.14□□□□□ -2.07
VPS13YLL040C MSK1P32048 576 aa2.14□□□□□ -2.07
VPS13YLL040C CSE2P33308 149 aa2.14□□□□□ -2.07
VPS13YLL040C SDH4P37298 181 aa2.14□□□□□ -2.07
VPS13YLL040C LRO1P40345 661 aa2.14□□□□□ -2.07
VPS13YLL040C TES1P41903 349 aaKnown RBP2.14□□□□□ -2.07
VPS13YLL040C YGL159WP53110 370 aa2.14□□□□□ -2.07
VPS13YLL040C COQ6P53318 479 aa2.14□□□□□ -2.07
VPS13YLL040C ALG12P53730 551 aa2.14□□□□□ -2.07
VPS13YLL040C YNR066CP53752 436 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms