RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W FMP45Q07651 309 aa4.73□□□□□ -1.65
CBF1YJR060W IRC19Q07843 230 aa4.73□□□□□ -1.65
CBF1YJR060W LOT6Q07923 191 aa4.73□□□□□ -1.65
CBF1YJR060W COQ10Q08058 207 aa4.73□□□□□ -1.65
CBF1YJR060W SKI7Q08491 747 aaPredicted RBP4.73□□□□□ -1.65
CBF1YJR060W RIB3Q99258 208 aa4.73□□□□□ -1.65
CBF1YJR060W Q0144Q9ZZW2 109 aa4.73□□□□□ -1.65
CBF1YJR060W MRP2P10663 115 aaPredicted RBP4.72□□□□□ -1.65
CBF1YJR060W DPM1P14020 267 aaKnown RBP4.72□□□□□ -1.65
CBF1YJR060W RPL3P14126 387 aaKnown RBP4.72□□□□□ -1.65
CBF1YJR060W TFS1P14306 219 aa4.72□□□□□ -1.65
CBF1YJR060W MDH1P17505 334 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
CBF1YJR060W UTR1P21373 530 aa4.72□□□□□ -1.65
CBF1YJR060W SCO1P23833 295 aa4.72□□□□□ -1.65
CBF1YJR060W RHB1P25378 209 aa4.72□□□□□ -1.65
CBF1YJR060W HSP30P25619 332 aa4.72□□□□□ -1.65
CBF1YJR060W ATS1P31386 333 aa4.72□□□□□ -1.65
CBF1YJR060W YEF1P32622 495 aa4.72□□□□□ -1.65
CBF1YJR060W TIM12P32830 109 aa4.72□□□□□ -1.65
CBF1YJR060W YKL071WP36086 256 aa4.72□□□□□ -1.65
CBF1YJR060W SLM4P38247 162 aa4.72□□□□□ -1.65
CBF1YJR060W TDA11P38854 504 aa4.72□□□□□ -1.65
CBF1YJR060W PRE6P40303 254 aaKnown RBP4.72□□□□□ -1.65
CBF1YJR060W POP1P41812 875 aa4.72□□□□□ -1.65
CBF1YJR060W MPP6P53725 186 aaPredicted RBP4.72□□□□□ -1.65
CBF1YJR060W HRI1Q05905 244 aaKnown RBP4.72□□□□□ -1.65
CBF1YJR060W SNT309Q06091 175 aaPredicted RBP4.72□□□□□ -1.65
CBF1YJR060W UIP4Q08926 304 aa4.72□□□□□ -1.65
CBF1YJR060W MHF1Q3E835 90 aa4.72□□□□□ -1.65
CBF1YJR060W SEC16P48415 2195 aaKnown RBP4.72□□□□□ -1.65
CBF1YJR060W TPK3P05986 398 aa4.71□□□□□ -1.66
CBF1YJR060W CBP6P07253 162 aaPredicted RBP4.71□□□□□ -1.66
CBF1YJR060W YOL162WP0CF19 215 aa4.71□□□□□ -1.66
CBF1YJR060W SNF6P18888 332 aa4.71□□□□□ -1.66
CBF1YJR060W YPK2P18961 677 aa4.71□□□□□ -1.66
CBF1YJR060W RPC34P32910 317 aa4.71□□□□□ -1.66
CBF1YJR060W ARC19P33204 171 aaKnown RBP4.71□□□□□ -1.66
CBF1YJR060W MSN4P33749 630 aa4.71□□□□□ -1.66
CBF1YJR060W SEC66P33754 206 aa4.71□□□□□ -1.66
CBF1YJR060W APD1P38281 316 aa4.71□□□□□ -1.66
CBF1YJR060W FET3P38993 636 aa4.71□□□□□ -1.66
CBF1YJR060W ISC1P40015 477 aaKnown RBP4.71□□□□□ -1.66
CBF1YJR060W RRG9P40156 214 aa4.71□□□□□ -1.66
CBF1YJR060W YFR054CP43622 192 aa4.71□□□□□ -1.66
CBF1YJR060W BNA3P47039 444 aaKnown RBP4.71□□□□□ -1.66
CBF1YJR060W SHE4P51534 789 aa4.71□□□□□ -1.66
CBF1YJR060W YGL235WP53071 178 aa4.71□□□□□ -1.66
CBF1YJR060W YGL101WP53144 215 aa4.71□□□□□ -1.66
CBF1YJR060W MEH1Q02205 184 aa4.71□□□□□ -1.66
CBF1YJR060W MRPL1Q04599 285 aa4.71□□□□□ -1.66
CBF1YJR060W COX20Q04935 205 aa4.71□□□□□ -1.66
CBF1YJR060W GAS2Q06135 555 aa4.71□□□□□ -1.66
CBF1YJR060W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
CBF1YJR060W YRA1Q12159 226 aaKnown RBP4.71□□□□□ -1.66
CBF1YJR060W YNL162W-AQ3E7A8 72 aa4.71□□□□□ -1.66
CBF1YJR060W CAR2P07991 424 aaKnown RBP4.7□□□□□ -1.66
CBF1YJR060W BOS1P25385 244 aa4.7□□□□□ -1.66
CBF1YJR060W ERG9P29704 444 aa4.7□□□□□ -1.66
CBF1YJR060W ECM8P38246 354 aa4.7□□□□□ -1.66
CBF1YJR060W RPS20P38701 121 aaKnown RBP4.7□□□□□ -1.66
CBF1YJR060W MLH1P38920 769 aa4.7□□□□□ -1.66
CBF1YJR060W XBP1P40489 647 aa4.7□□□□□ -1.66
CBF1YJR060W SNX41Q04053 625 aa4.7□□□□□ -1.66
CBF1YJR060W SMP3Q04174 516 aa4.7□□□□□ -1.66
CBF1YJR060W COQ11Q05892 277 aa4.7□□□□□ -1.66
CBF1YJR060W RDL2Q08742 149 aaKnown RBP4.7□□□□□ -1.66
CBF1YJR060W GRE1Q08969 168 aa4.7□□□□□ -1.66
CBF1YJR060W HER1Q12276 1246 aa4.7□□□□□ -1.66
CBF1YJR060W SET6Q12529 373 aa4.7□□□□□ -1.66
CBF1YJR060W YBR056W-AI2HB52 66 aa4.69□□□□□ -1.66
CBF1YJR060W CDC36P06100 191 aaPredicted RBP4.69□□□□□ -1.66
CBF1YJR060W RHO1P06780 209 aaKnown RBP4.69□□□□□ -1.66
CBF1YJR060W RPL43AP0CX25 92 aaKnown RBP4.69□□□□□ -1.66
CBF1YJR060W RPL43BP0CX26 92 aa4.69□□□□□ -1.66
CBF1YJR060W CPR2P23285 205 aa4.69□□□□□ -1.66
CBF1YJR060W ERV1P27882 189 aa4.69□□□□□ -1.66
CBF1YJR060W CYS4P32582 507 aaKnown RBP4.69□□□□□ -1.66
CBF1YJR060W RPS0AP32905 252 aaKnown RBP4.69□□□□□ -1.66
CBF1YJR060W MRPL39P36533 70 aa4.69□□□□□ -1.66
CBF1YJR060W CHK1P38147 527 aa4.69□□□□□ -1.66
CBF1YJR060W ARN2P38724 620 aa4.69□□□□□ -1.66
CBF1YJR060W YER184CP39961 794 aa4.69□□□□□ -1.66
CBF1YJR060W SHO1P40073 367 aa4.69□□□□□ -1.66
CBF1YJR060W HMS2P47175 358 aa4.69□□□□□ -1.66
CBF1YJR060W YGR126WP53274 230 aa4.69□□□□□ -1.66
CBF1YJR060W YNR062CP53748 327 aa4.69□□□□□ -1.66
CBF1YJR060W COS1P53822 381 aa4.69□□□□□ -1.66
CBF1YJR060W ASI1P54074 624 aa4.69□□□□□ -1.66
CBF1YJR060W KAP120Q02932 1032 aa4.69□□□□□ -1.66
CBF1YJR060W ELP6Q04868 273 aa4.69□□□□□ -1.66
CBF1YJR060W NIP7Q08962 181 aaKnown RBP4.69□□□□□ -1.66
CBF1YJR060W YLR126CQ12288 251 aa4.69□□□□□ -1.66
CBF1YJR060W ISN1Q99312 450 aa4.69□□□□□ -1.66
CBF1YJR060W RPC40P07703 335 aaKnown RBP4.68□□□□□ -1.66
CBF1YJR060W SPO7P18410 259 aa4.68□□□□□ -1.66
CBF1YJR060W YCR100CP25606 316 aa4.68□□□□□ -1.66
CBF1YJR060W CDC39P25655 2108 aaKnown RBP4.68□□□□□ -1.66
CBF1YJR060W YMR262WP38430 313 aa4.68□□□□□ -1.66
CBF1YJR060W SBE22P38814 852 aa4.68□□□□□ -1.66
CBF1YJR060W YRB2P40517 327 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms