RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C PNC1P53184 216 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C YNL134CP53912 376 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C SRL4Q03085 281 aa1.7□□□□□ -2.14
VPS35YJL154C CSI1Q04368 295 aa1.7□□□□□ -2.14
VPS35YJL154C SPC2Q04969 178 aa1.7□□□□□ -2.14
VPS35YJL154C RRG8Q06109 277 aa1.7□□□□□ -2.14
VPS35YJL154C PBP4Q07362 185 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C RRP42Q12277 265 aaPredicted RBP1.7□□□□□ -2.14
VPS35YJL154C ERP3Q12403 225 aa1.7□□□□□ -2.14
VPS35YJL154C YRF1-3P0CX14 1859 aa1.7□□□□□ -2.14
VPS35YJL154C YRF1-7P0CX15 1859 aa1.7□□□□□ -2.14
VPS35YJL154C YRF1-6P53819 1859 aa1.7□□□□□ -2.14
VPS35YJL154C TCP1P12612 559 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C SPS100P13130 326 aa1.7□□□□□ -2.14
VPS35YJL154C CSM1P25651 190 aa1.7□□□□□ -2.14
VPS35YJL154C ZIP1P31111 875 aa1.7□□□□□ -2.14
VPS35YJL154C UBC6P33296 250 aaPredicted RBP1.7□□□□□ -2.14
VPS35YJL154C RPC25P35718 212 aa1.7□□□□□ -2.14
VPS35YJL154C MID2P36027 376 aa1.7□□□□□ -2.14
VPS35YJL154C SWD2P36104 329 aaPredicted RBP1.7□□□□□ -2.14
VPS35YJL154C DSE1P40077 573 aa1.7□□□□□ -2.14
VPS35YJL154C COX16P47081 118 aa1.7□□□□□ -2.14
VPS35YJL154C YJR054WP47114 497 aa1.7□□□□□ -2.14
VPS35YJL154C RIB4P50861 169 aaPredicted RBP1.7□□□□□ -2.14
VPS35YJL154C DBP6P53734 629 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C SUR7P54003 302 aa1.7□□□□□ -2.14
VPS35YJL154C MCT1Q12283 360 aa1.7□□□□□ -2.14
VPS35YJL154C UTP23Q12339 254 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C MED4Q12343 284 aa1.7□□□□□ -2.14
VPS35YJL154C SSA3P09435 649 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C BMH1P29311 267 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C PRS1P32895 427 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C YPT52P36018 234 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C EFM1P38732 585 aa1.69□□□□□ -2.14
VPS35YJL154C YHR035WP38769 630 aa1.69□□□□□ -2.14
VPS35YJL154C GGC1P38988 300 aa1.69□□□□□ -2.14
VPS35YJL154C RSM25P40496 264 aa1.69□□□□□ -2.14
VPS35YJL154C YFL012WP43580 148 aa1.69□□□□□ -2.14
VPS35YJL154C GLG2P47011 380 aa1.69□□□□□ -2.14
VPS35YJL154C GTO1P48239 356 aa1.69□□□□□ -2.14
VPS35YJL154C PET117Q02771 107 aa1.69□□□□□ -2.14
VPS35YJL154C VPS60Q03390 229 aa1.69□□□□□ -2.14
VPS35YJL154C SEC10Q06245 871 aa1.69□□□□□ -2.14
VPS35YJL154C YLL007CQ07799 665 aa1.69□□□□□ -2.14
VPS35YJL154C RDL2Q08742 149 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C SLM3Q12093 417 aa1.69□□□□□ -2.14
VPS35YJL154C SEN1Q00416 2231 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C YAK1P14680 807 aa1.69□□□□□ -2.14
VPS35YJL154C RAD23P32628 398 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C YHR045WP38775 560 aa1.69□□□□□ -2.14
VPS35YJL154C EGD2P38879 174 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C AGE2P40529 298 aa1.69□□□□□ -2.14
VPS35YJL154C SNZ3P43545 298 aa1.69□□□□□ -2.14
VPS35YJL154C EMC2P47133 292 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C SNZ2P53824 298 aa1.69□□□□□ -2.14
VPS35YJL154C SPO19Q03029 223 aa1.69□□□□□ -2.14
VPS35YJL154C UTP15Q04305 513 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C MRX9Q07349 420 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C RPN8Q08723 338 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C GET4Q12125 312 aa1.69□□□□□ -2.14
VPS35YJL154C SIA1Q12212 622 aa1.69□□□□□ -2.14
VPS35YJL154C YOL107WQ12239 342 aa1.69□□□□□ -2.14
VPS35YJL154C PAA1Q12447 191 aaKnown RBP1.69□□□□□ -2.14
VPS35YJL154C YOS9Q99220 542 aa1.69□□□□□ -2.14
VPS35YJL154C RPS19AP07280 144 aaKnown RBP1.68□□□□□ -2.14
VPS35YJL154C RPS19BP07281 144 aaPredicted RBP1.68□□□□□ -2.14
VPS35YJL154C UGA1P17649 471 aa1.68□□□□□ -2.14
VPS35YJL154C MEK1P24719 497 aaPredicted RBP1.68□□□□□ -2.14
VPS35YJL154C RPL16BP26785 198 aaKnown RBP1.68□□□□□ -2.14
VPS35YJL154C PDC2P32896 925 aa1.68□□□□□ -2.14
VPS35YJL154C NUF2P33895 451 aa1.68□□□□□ -2.14
VPS35YJL154C DTR1P38125 572 aa1.68□□□□□ -2.14
VPS35YJL154C MRP21P38175 177 aa1.68□□□□□ -2.14
VPS35YJL154C SHE1P38200 338 aa1.68□□□□□ -2.14
VPS35YJL154C SHE3P38272 425 aaKnown RBP1.68□□□□□ -2.14
VPS35YJL154C POP7P38291 140 aa1.68□□□□□ -2.14
VPS35YJL154C FMC1P40491 155 aa1.68□□□□□ -2.14
VPS35YJL154C YGL185CP53100 379 aa1.68□□□□□ -2.14
VPS35YJL154C MND1P53102 219 aa1.68□□□□□ -2.14
VPS35YJL154C SWC4P53201 476 aa1.68□□□□□ -2.14
VPS35YJL154C UBX2Q04228 584 aa1.68□□□□□ -2.14
VPS35YJL154C ATG17Q06410 417 aa1.68□□□□□ -2.14
VPS35YJL154C RPN6Q12377 434 aa1.68□□□□□ -2.14
VPS35YJL154C REP1P03871 373 aa1.68□□□□□ -2.14
VPS35YJL154C CBP6P07253 162 aaPredicted RBP1.68□□□□□ -2.14
VPS35YJL154C SUR2P38992 349 aa1.68□□□□□ -2.14
VPS35YJL154C ERG10P41338 398 aaKnown RBP1.68□□□□□ -2.14
VPS35YJL154C DIA1P54005 336 aa1.68□□□□□ -2.14
VPS35YJL154C SNX41Q04053 625 aa1.68□□□□□ -2.14
VPS35YJL154C API2Q04413 109 aa1.68□□□□□ -2.14
VPS35YJL154C APC4Q04601 652 aa1.68□□□□□ -2.14
VPS35YJL154C TAF10Q12030 206 aa1.68□□□□□ -2.14
VPS35YJL154C FAS2P19097 1887 aaKnown RBP1.68□□□□□ -2.14
VPS35YJL154C MSF1P08425 469 aa1.67□□□□□ -2.14
VPS35YJL154C DSF1P0CX08 502 aa1.67□□□□□ -2.14
VPS35YJL154C YNR073CP0CX09 502 aa1.67□□□□□ -2.14
VPS35YJL154C RPL35AP0CX84 120 aaKnown RBP1.67□□□□□ -2.14
VPS35YJL154C RPL35BP0CX85 120 aaKnown RBP1.67□□□□□ -2.14
VPS35YJL154C MRPL20P22354 195 aaPredicted RBP1.67□□□□□ -2.14
VPS35YJL154C DPB2P24482 689 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms