RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	COX20	Q04935	205 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	NDE2	Q07500	545 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	THP1	Q08231	455 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	RDL2	Q08742	149 aa	Known RBP	0.8	□□□□□ -2.28
PAM16	YJL104W	APC2	Q12440	853 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	RTN2	Q12443	393 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	YCL048W-A	Q2V2Q2	79 aa		0.8	□□□□□ -2.28
PAM16	YJL104W	ATP4	P05626	244 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	RPL6B	P05739	176 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	RPL22A	P05749	121 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	KIN28	P06242	306 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	PEP4	P07267	405 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	ARD1	P07347	238 aa	Predicted RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	COS2	P0CX12	379 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	COS3	P0CX13	379 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	KSS1	P14681	368 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	NMT1	P14743	455 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	ART10	P18634	518 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	RPB5	P20434	215 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	CMK2	P22517	447 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	SLM5	P25345	492 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	PBN1	P25580	416 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	IDH2	P28241	369 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	AFG1	P32317	509 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	HSP150	P32478	413 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
PAM16	YJL104W	DOA1	P36037	715 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	YBR241C	P38142	488 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	GPI18	P38211	433 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	TCM62	P38228	572 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	ZTA1	P38230	334 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	PEX32	P38292	413 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	HIS2	P38635	335 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	NSG1	P38837	291 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	YHR180W	P38868	163 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	GGC1	P38988	300 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	COG3	P40094	801 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	COS4	P43542	379 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	RPA43	P46669	326 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	AAD10	P47182	288 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	UPF3	P48412	387 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	TAF6	P53040	516 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	GEP7	P53171	287 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	CLD1	P53264	445 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	RHO5	P53879	331 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	REX2	P54964	269 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	KAP120	Q02932	1032 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	BUD22	Q04347	519 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	SOV1	Q04748	898 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	SSQ1	Q05931	657 aa	Predicted RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	YPR195C	Q06594	109 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	ARR1	Q06596	294 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	IRC19	Q07843	230 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	SLF1	Q12034	447 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	YDL109C	Q12103	647 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	RUD3	Q12234	484 aa	Known RBP	0.79	□□□□□ -2.28
PAM16	YJL104W	YOR214C	Q12282	236 aa		0.79	□□□□□ -2.28
PAM16	YJL104W	YAL064W-B	O13512	126 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	TDH1	P00360	332 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	CBP2	P03874	630 aa	Predicted RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	PET9	P18239	318 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	EXG1	P23776	448 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	ROX3	P25046	220 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SPB1	P25582	841 aa	Predicted RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	EHD3	P28817	500 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SRB4	P32569	687 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SLC1	P33333	303 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	ZRT3	P34240	503 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	RPC25	P35718	212 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YOR062C	P36025	268 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	CBP4	P37267	147 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	MST28	P39552	234 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YER184C	P39961	794 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YER084W	P40057	128 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SEC9	P40357	651 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SEC28	P40509	296 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	HIS6	P40545	261 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	GAT4	P40569	121 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	GLR1	P41921	483 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	PRM10	P42946	383 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YFL012W	P43580	148 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	MIC19	P43594	170 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YFR035C	P43608	114 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	AIF1	P52923	378 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	BOL2	P53082	120 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	EFM5	P53200	248 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	TPC1	P53257	314 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	PET191	Q02772	108 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	SWP1	Q02795	286 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	NCE101	Q02820	53 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YMR279C	Q03263	540 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	ATG16	Q03818	150 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	RRB1	Q04225	511 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	VMS1	Q04311	632 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	URC2	Q04411	772 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YDR222W	Q04925	415 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YLR287C	Q05881	355 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	LIP2	Q06005	328 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YLR177W	Q06251	628 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	IPK1	Q06667	281 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms