RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W GPG1P53130 126 aa9.99□□□□□ -0.81
SIM1YIL123W GIS1Q03833 894 aa9.99□□□□□ -0.81
SIM1YIL123W VBA4Q04602 768 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W COA4Q05809 96 aa9.99□□□□□ -0.81
SIM1YIL123W YLR283WQ05867 314 aa9.99□□□□□ -0.81
SIM1YIL123W YCP4P25349 247 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W CAM1P29547 415 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W MCM10P32354 571 aa9.99□□□□□ -0.81
SIM1YIL123W GRE3P38715 327 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
SIM1YIL123W RFC4P40339 323 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W YIP4P53093 235 aa9.99□□□□□ -0.81
SIM1YIL123W FMP48P53233 369 aa9.99□□□□□ -0.81
SIM1YIL123W ASI3P53983 676 aa9.99□□□□□ -0.81
SIM1YIL123W PLP1Q04004 230 aa9.99□□□□□ -0.81
SIM1YIL123W UTP15Q04305 513 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W SCEIP03882 235 aa9.98□□□□□ -0.81
SIM1YIL123W CHO1P08456 276 aa9.98□□□□□ -0.81
SIM1YIL123W KRR1P25586 316 aaPredicted RBP9.98□□□□□ -0.81
SIM1YIL123W SHO1P40073 367 aa9.98□□□□□ -0.81
SIM1YIL123W REE1P40893 198 aa9.98□□□□□ -0.81
SIM1YIL123W TY1A-MR1Q04215 440 aa9.98□□□□□ -0.81
SIM1YIL123W DFG5Q05031 458 aa9.98□□□□□ -0.81
SIM1YIL123W FSH3Q99369 266 aa9.98□□□□□ -0.81
SIM1YIL123W COS9P36034 407 aa9.97□□□□□ -0.81
SIM1YIL123W FRM2P37261 193 aa9.97□□□□□ -0.81
SIM1YIL123W APL3P38065 1025 aa9.97□□□□□ -0.81
SIM1YIL123W TCM62P38228 572 aaKnown RBP9.97□□□□□ -0.81
SIM1YIL123W OM14P38325 134 aa9.97□□□□□ -0.81
SIM1YIL123W DLS1P40366 167 aa9.97□□□□□ -0.81
SIM1YIL123W YIL060WP40519 144 aa9.97□□□□□ -0.81
SIM1YIL123W NIT2P47016 307 aa9.97□□□□□ -0.81
SIM1YIL123W UBX6P47049 396 aa9.97□□□□□ -0.81
SIM1YIL123W SCW4P53334 386 aaKnown RBP9.97□□□□□ -0.81
SIM1YIL123W SAM50P53969 484 aa9.97□□□□□ -0.81
SIM1YIL123W RRP15Q06511 250 aaPredicted RBP9.97□□□□□ -0.81
SIM1YIL123W RSC58Q07979 502 aa9.97□□□□□ -0.81
SIM1YIL123W FUR4P05316 633 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W RPL3P14126 387 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W CTA1P15202 515 aa9.96□□□□□ -0.82
SIM1YIL123W SPO7P18410 259 aa9.96□□□□□ -0.82
SIM1YIL123W STE4P18851 423 aa9.96□□□□□ -0.82
SIM1YIL123W ERG8P24521 451 aa9.96□□□□□ -0.82
SIM1YIL123W DBF20P32328 564 aa9.96□□□□□ -0.82
SIM1YIL123W SNC2P33328 115 aa9.96□□□□□ -0.82
SIM1YIL123W WBP1P33767 430 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W SSH1P38353 490 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W RRF1P38771 230 aa9.96□□□□□ -0.82
SIM1YIL123W GPI14P47088 403 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W POP6P53218 158 aa9.96□□□□□ -0.82
SIM1YIL123W BUD25P85052 153 aa9.96□□□□□ -0.82
SIM1YIL123W RPL6AQ02326 176 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W CTF19Q02732 369 aa9.96□□□□□ -0.82
SIM1YIL123W TY1A-DR2Q03964 440 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W CTS2Q06350 511 aa9.96□□□□□ -0.82
SIM1YIL123W HEM25Q07534 307 aa9.96□□□□□ -0.82
SIM1YIL123W RDI1Q12434 202 aa9.96□□□□□ -0.82
SIM1YIL123W GLT1Q12680 2145 aaKnown RBP9.96□□□□□ -0.82
SIM1YIL123W YHR214C-EQ8TGK0 99 aa9.96□□□□□ -0.82
SIM1YIL123W YLR358CO13565 187 aa9.95□□□□□ -0.82
SIM1YIL123W GCD1P09032 578 aaPredicted RBP9.95□□□□□ -0.82
SIM1YIL123W PUG1P40100 303 aa9.95□□□□□ -0.82
SIM1YIL123W SLZ1P40167 298 aa9.95□□□□□ -0.82
SIM1YIL123W TIR3P40552 269 aa9.95□□□□□ -0.82
SIM1YIL123W SLI1P53304 468 aa9.95□□□□□ -0.82
SIM1YIL123W BSC5P53755 489 aa9.95□□□□□ -0.82
SIM1YIL123W RAX1Q08760 435 aa9.95□□□□□ -0.82
SIM1YIL123W RRI1Q12468 440 aa9.95□□□□□ -0.82
SIM1YIL123W PDX1P16451 410 aa9.94□□□□□ -0.82
SIM1YIL123W PET18P25362 215 aa9.94□□□□□ -0.82
SIM1YIL123W NAB2P32505 525 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
SIM1YIL123W MSS1P32559 526 aaPredicted RBP9.94□□□□□ -0.82
SIM1YIL123W BUD8P41698 603 aa9.94□□□□□ -0.82
SIM1YIL123W ERJ5P43613 295 aaPredicted RBP9.94□□□□□ -0.82
SIM1YIL123W MSY1P48527 492 aa9.94□□□□□ -0.82
SIM1YIL123W YGR042WP53227 271 aa9.94□□□□□ -0.82
SIM1YIL123W YGR066CP53242 292 aa9.94□□□□□ -0.82
SIM1YIL123W SDC1Q03323 175 aa9.94□□□□□ -0.82
SIM1YIL123W NUP53Q03790 475 aa9.94□□□□□ -0.82
SIM1YIL123W YDR102CQ03864 110 aa9.94□□□□□ -0.82
SIM1YIL123W YLR031WQ07978 186 aa9.94□□□□□ -0.82
SIM1YIL123W YNG1Q08465 219 aa9.94□□□□□ -0.82
SIM1YIL123W YOR385WQ08909 290 aa9.94□□□□□ -0.82
SIM1YIL123W TGS1Q12052 315 aa9.94□□□□□ -0.82
SIM1YIL123W ODC2Q99297 307 aa9.94□□□□□ -0.82
SIM1YIL123W PRB1P09232 635 aa9.93□□□□□ -0.82
SIM1YIL123W UTR1P21373 530 aa9.93□□□□□ -0.82
SIM1YIL123W NFS1P25374 497 aa9.93□□□□□ -0.82
SIM1YIL123W AVT7P40501 490 aa9.93□□□□□ -0.82
SIM1YIL123W OTU1P43558 301 aa9.93□□□□□ -0.82
SIM1YIL123W AAH1P53909 347 aa9.93□□□□□ -0.82
SIM1YIL123W VBA1Q04301 562 aa9.93□□□□□ -0.82
SIM1YIL123W FRE3Q08905 711 aa9.93□□□□□ -0.82
SIM1YIL123W CSF1Q12150 2958 aa9.93□□□□□ -0.82
SIM1YIL123W ACC1Q00955 2233 aaKnown RBP9.93□□□□□ -0.82
SIM1YIL123W URA3P03962 267 aa9.92□□□□□ -0.82
SIM1YIL123W GLY1P37303 387 aaKnown RBP9.92□□□□□ -0.82
SIM1YIL123W ECO1P43605 281 aa9.92□□□□□ -0.82
SIM1YIL123W RVB1Q03940 463 aaKnown RBP9.92□□□□□ -0.82
SIM1YIL123W MIX14Q04341 121 aa9.92□□□□□ -0.82
SIM1YIL123W YPL272CQ08984 517 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms