RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YOL163WP0CF20 169 aa3.15□□□□□ -1.91
CAF130YGR134W APE2P32454 952 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W YOX1P34161 385 aa3.15□□□□□ -1.91
CAF130YGR134W YBR062CP38239 180 aa3.15□□□□□ -1.91
CAF130YGR134W TES1P41903 349 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W CIN2P46670 268 aa3.15□□□□□ -1.91
CAF130YGR134W ASN1P49089 572 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W TIM44Q01852 431 aa3.15□□□□□ -1.91
CAF130YGR134W SDC1Q03323 175 aa3.15□□□□□ -1.91
CAF130YGR134W ECM11Q04110 302 aa3.15□□□□□ -1.91
CAF130YGR134W VPS74Q06385 345 aa3.15□□□□□ -1.91
CAF130YGR134W NOC4Q06512 552 aaPredicted RBP3.15□□□□□ -1.91
CAF130YGR134W MHR1Q06630 226 aa3.15□□□□□ -1.91
CAF130YGR134W WIP1Q2V2P8 89 aa3.15□□□□□ -1.91
CAF130YGR134W RSF2P46974 1380 aa3.15□□□□□ -1.91
CAF130YGR134W RPS13P05756 151 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W ALG7P07286 448 aa3.14□□□□□ -1.91
CAF130YGR134W TIP20P33891 701 aa3.14□□□□□ -1.91
CAF130YGR134W FMP23P38231 175 aa3.14□□□□□ -1.91
CAF130YGR134W VAB2P40003 282 aa3.14□□□□□ -1.91
CAF130YGR134W WWM1P43582 211 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W PEX12Q04370 399 aa3.14□□□□□ -1.91
CAF130YGR134W YMR027WQ04371 470 aa3.14□□□□□ -1.91
CAF130YGR134W DDP1Q99321 188 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W CYC7P00045 113 aa3.14□□□□□ -1.91
CAF130YGR134W RNA15P25299 296 aaPredicted RBP3.14□□□□□ -1.91
CAF130YGR134W YMC1P32331 307 aa3.14□□□□□ -1.91
CAF130YGR134W PET8P38921 284 aa3.14□□□□□ -1.91
CAF130YGR134W LYS1P38998 373 aaRIP-Chip data3.14□□□□□ -1.91not detected
CAF130YGR134W YIL067CP40514 678 aa3.14□□□□□ -1.91
CAF130YGR134W YJR054WP47114 497 aa3.14□□□□□ -1.91
CAF130YGR134W HMS2P47175 358 aa3.14□□□□□ -1.91
CAF130YGR134W PHB2P50085 310 aa3.14□□□□□ -1.91
CAF130YGR134W UTP15Q04305 513 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W SFM1Q12314 213 aa3.14□□□□□ -1.91
CAF130YGR134W AGC1Q12482 902 aa3.14□□□□□ -1.91
CAF130YGR134W TPK3P05986 398 aa3.14□□□□□ -1.91
CAF130YGR134W GCY1P14065 312 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
CAF130YGR134W ATG15P25641 520 aa3.14□□□□□ -1.91
CAF130YGR134W SNC1P31109 117 aa3.14□□□□□ -1.91
CAF130YGR134W SPS18P32572 300 aa3.14□□□□□ -1.91
CAF130YGR134W PAC2P39937 518 aa3.14□□□□□ -1.91
CAF130YGR134W ISC1P40015 477 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W CSM2P40465 213 aa3.14□□□□□ -1.91
CAF130YGR134W POP1P41812 875 aa3.14□□□□□ -1.91
CAF130YGR134W NSA1P53136 463 aaPredicted RBP3.14□□□□□ -1.91
CAF130YGR134W GPI1P53306 609 aa3.14□□□□□ -1.91
CAF130YGR134W YMR279CQ03263 540 aa3.14□□□□□ -1.91
CAF130YGR134W FAR10Q06001 478 aa3.14□□□□□ -1.91
CAF130YGR134W RSA1Q08932 381 aa3.14□□□□□ -1.91
CAF130YGR134W SAM4Q08985 325 aaKnown RBP3.14□□□□□ -1.91
CAF130YGR134W BSC1Q12140 328 aa3.14□□□□□ -1.91
CAF130YGR134W TPO4Q12256 659 aa3.14□□□□□ -1.91
CAF130YGR134W PET20Q99373 253 aa3.14□□□□□ -1.91
CAF130YGR134W PUT1P09368 476 aa3.13□□□□□ -1.91
CAF130YGR134W CDC10P25342 322 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W TRR1P29509 319 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W PDC2P32896 925 aa3.13□□□□□ -1.91
CAF130YGR134W SWD2P36104 329 aaPredicted RBP3.13□□□□□ -1.91
CAF130YGR134W MST28P39552 234 aa3.13□□□□□ -1.91
CAF130YGR134W OXA1P39952 402 aa3.13□□□□□ -1.91
CAF130YGR134W MCM22P47167 239 aa3.13□□□□□ -1.91
CAF130YGR134W PHO23P50947 330 aa3.13□□□□□ -1.91
CAF130YGR134W YPL034WQ03083 165 aa3.13□□□□□ -1.91
CAF130YGR134W SNX41Q04053 625 aa3.13□□□□□ -1.91
CAF130YGR134W RDL2Q08742 149 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W FRE8Q12209 686 aa3.13□□□□□ -1.91
CAF130YGR134W RDL1Q12305 139 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W RDI1Q12434 202 aa3.13□□□□□ -1.91
CAF130YGR134W COS2P0CX12 379 aa3.13□□□□□ -1.91
CAF130YGR134W COS3P0CX13 379 aa3.13□□□□□ -1.91
CAF130YGR134W ERD2P18414 219 aa3.13□□□□□ -1.91
CAF130YGR134W IFM1P25038 676 aa3.13□□□□□ -1.91
CAF130YGR134W SLM5P25345 492 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W HIS7P33734 552 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W TIR2P33890 251 aa3.13□□□□□ -1.91
CAF130YGR134W JEN1P36035 616 aa3.13□□□□□ -1.91
CAF130YGR134W MDM31P38880 579 aa3.13□□□□□ -1.91
CAF130YGR134W MMF1P40185 145 aaKnown RBP3.13□□□□□ -1.91
CAF130YGR134W COS4P43542 379 aa3.13□□□□□ -1.91
CAF130YGR134W TRM9P49957 279 aa3.13□□□□□ -1.91
CAF130YGR134W CAF40P53829 373 aa3.13□□□□□ -1.91
CAF130YGR134W HSK3P69852 69 aa3.13□□□□□ -1.91
CAF130YGR134W ODC1Q03028 310 aa3.13□□□□□ -1.91
CAF130YGR134W MIM1Q08176 113 aa3.13□□□□□ -1.91
CAF130YGR134W NCA2Q12374 616 aa3.13□□□□□ -1.91
CAF130YGR134W PRM4Q12498 284 aa3.13□□□□□ -1.91
CAF130YGR134W DPM1P14020 267 aaKnown RBP3.12□□□□□ -1.91
CAF130YGR134W SRP102P36057 244 aaPredicted RBP3.12□□□□□ -1.91
CAF130YGR134W MRPL28P36527 147 aa3.12□□□□□ -1.91
CAF130YGR134W ROT2P38138 954 aa3.12□□□□□ -1.91
CAF130YGR134W HEM14P40012 539 aa3.12□□□□□ -1.91
CAF130YGR134W TPC1P53257 314 aa3.12□□□□□ -1.91
CAF130YGR134W CPD1P53314 239 aa3.12□□□□□ -1.91
CAF130YGR134W SEI1Q06058 285 aa3.12□□□□□ -1.91
CAF130YGR134W SFH1Q06168 426 aa3.12□□□□□ -1.91
CAF130YGR134W YAP7Q08182 245 aa3.12□□□□□ -1.91
CAF130YGR134W FCY22Q12119 530 aa3.12□□□□□ -1.91
CAF130YGR134W RPS3P05750 240 aaKnown RBP3.12□□□□□ -1.91
CAF130YGR134W TIP1P27654 210 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms