RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT1	YFL038C	SUA5	P32579	426 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	MKS1	P34072	584 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	SRP102	P36057	244 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	MRPL15	P36523	253 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	MRPL27	P36526	146 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	YPC1	P38298	316 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	ARO9	P38840	513 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	YHR180W	P38868	163 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	YNL208W	P40159	199 aa	Known RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	AVT7	P40501	490 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	SHR5	P41912	237 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	OTU1	P43558	301 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	GPI14	P47088	403 aa	Known RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	TYW3	P53177	273 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	CWC25	P53854	179 aa	Known RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	YMR210W	Q03649	449 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	PAL1	Q05518	499 aa	Known RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	ANT1	Q06497	328 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	RTK1	Q12100	620 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT1	YFL038C	YOR343C	Q12484	108 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	YOS9	Q99220	542 aa		5.84	□□□□□ -1.47
YPT1	YFL038C	REP2	P03872	296 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	FUR4	P05316	633 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	CDC34	P14682	295 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	AIM17	P23180	465 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	CPR4	P25334	318 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	DBF20	P32328	564 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	EMP24	P32803	203 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	SNC2	P33328	115 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	CBT1	P36038	271 aa	Predicted RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	TIF11	P38912	153 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	BMT5	P40493	336 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	NAS2	P40555	220 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	GLR1	P41921	483 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	YFR054C	P43622	192 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	TAD2	P47058	250 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	YIP4	P53093	235 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	RMD9	P53140	646 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	SLI1	P53304	468 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	SCW4	P53334	386 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	YNR014W	P53719	212 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	BUD25	P85052	153 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	NAM8	Q00539	523 aa	Known RBP	5.83	□□□□□ -1.48
YPT1	YFL038C	ARG5,6	Q01217	863 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	YDR249C	Q03787	373 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	BNA7	Q04066	261 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	BNA5	Q05979	453 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	DIC1	Q06143	298 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	HNT3	Q08702	217 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	YLR108C	Q12259	485 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	ODC2	Q99297	307 aa		5.83	□□□□□ -1.48
YPT1	YFL038C	ARF1	P11076	181 aa	Known RBP	5.82	□□□□□ -1.48
YPT1	YFL038C	URA6	P15700	204 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	FUS3	P16892	353 aa	Known RBP	5.82	□□□□□ -1.48
YPT1	YFL038C	CPR2	P23285	205 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	MRP20	P32387	263 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	ALG3	P38179	458 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	YJL193W	P39542	402 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	GNP1	P48813	663 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	PHB2	P50085	310 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	INN1	P53901	409 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	NRK1	P53915	240 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	HEM25	Q07534	307 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	MIM1	Q08176	113 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	ATP16	Q12165	160 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	PAR32	Q12515	295 aa	Known RBP	5.82	□□□□□ -1.48
YPT1	YFL038C	TAD3	Q9URQ3	322 aa		5.82	□□□□□ -1.48
YPT1	YFL038C	RPP1A	P05318	106 aa	Predicted RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	RPL1A	P0CX43	217 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	RPL1B	P0CX44	217 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	CTA1	P15202	515 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	GLK1	P17709	500 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	HNM1	P19807	563 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	MEK1	P24719	497 aa	Predicted RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	CNB1	P25296	175 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	NFS1	P25374	497 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	CWP1	P28319	239 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	TRR1	P29509	319 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	FAA1	P30624	700 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	VMA8	P32610	256 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	PDC2	P32896	925 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	SRY1	P36007	326 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	MRPL36	P36531	177 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	SSH1	P38353	490 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	COS8	P38723	381 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	PUG1	P40100	303 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	DLS1	P40366	167 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	BUD8	P41698	603 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	CIN2	P46670	268 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	HAM1	P47119	197 aa	Known RBP	5.81	□□□□□ -1.48
YPT1	YFL038C	BXI1	P48558	297 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	BRR6	P53062	197 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	YGR066C	P53242	292 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
YPT1	YFL038C	PEX25	Q02969	394 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	IRC19	Q07843	230 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	GRC3	Q07845	632 aa		5.81	□□□□□ -1.48
YPT1	YFL038C	STE18	P18852	110 aa		5.8	□□□□□ -1.48
YPT1	YFL038C	SEC22	P22214	214 aa		5.8	□□□□□ -1.48
YPT1	YFL038C	HXT2	P23585	541 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms