RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	ASP3-1	P0CZ17	362 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	KSS1	P14681	368 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	STE18	P18852	110 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	HOM6	P31116	359 aa	Known RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	VPS21	P36017	210 aa	Known RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	MRP21	P38175	177 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	SLX1	P38324	304 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	MIC12	P38341	106 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	JHD2	P47156	728 aa	Predicted RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	EFM5	P53200	248 aa	Known RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	ZRG17	P53735	605 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	YNL095C	P53932	642 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	RPL21A	Q02753	160 aa	Known RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	GET4	Q12125	312 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	WTM1	Q12363	437 aa	Known RBP	4.12	□□□□□ -1.75
SNM1	YDR478W	SEY1	Q99287	776 aa		4.12	□□□□□ -1.75
SNM1	YDR478W	FUS3	P16892	353 aa	Known RBP	4.11	□□□□□ -1.75
SNM1	YDR478W	PRP18	P33411	251 aa	Predicted RBP	4.11	□□□□□ -1.75
SNM1	YDR478W	RIB1	P38066	345 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	RFT1	P38206	574 aa	Predicted RBP	4.11	□□□□□ -1.75
SNM1	YDR478W	FZO1	P38297	855 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	MED8	P38304	223 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	GGC1	P38988	300 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	SEN34	P39707	275 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	KRE29	P40026	464 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	YJR079W	P47126	109 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	RMI1	Q02685	241 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	YMR226C	Q05016	267 aa	Known RBP	4.11	□□□□□ -1.75
SNM1	YDR478W	YPR098C	Q06089	161 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	YCT1	Q12235	531 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	YPL119C-A	Q3E751	87 aa		4.11	□□□□□ -1.75
SNM1	YDR478W	CDC33	P07260	213 aa	Known RBP	4.1	□□□□□ -1.75
SNM1	YDR478W	CAM1	P29547	415 aa	Known RBP	4.1	□□□□□ -1.75
SNM1	YDR478W	MGM101	P32787	269 aa	Known RBP	4.1	□□□□□ -1.75
SNM1	YDR478W	MBA1	P38300	278 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	CUE1	P38428	203 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	SER33	P40510	469 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	FMP48	P53233	369 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	SWS2	P53937	143 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	YPL278C	Q08990	100 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	HRT3	Q12347	344 aa		4.1	□□□□□ -1.75
SNM1	YDR478W	POX1	P13711	748 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	IMP1	P28627	190 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	SPS19	P32573	292 aa	Known RBP	4.09	□□□□□ -1.75
SNM1	YDR478W	TIP20	P33891	701 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	JEN1	P36035	616 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	CBT1	P36038	271 aa	Predicted RBP	4.09	□□□□□ -1.75
SNM1	YDR478W	ECM4	P36156	370 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	MRPL3	P36516	390 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	FRM2	P37261	193 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	SWD3	P38123	315 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	RTC3	P38804	111 aa	Predicted RBP	4.09	□□□□□ -1.75
SNM1	YDR478W	RFC4	P40339	323 aa	Known RBP	4.09	□□□□□ -1.75
SNM1	YDR478W	API2	Q04413	109 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	PEX10	Q05568	337 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	ATG17	Q06410	417 aa		4.09	□□□□□ -1.75
SNM1	YDR478W	IKI3	Q06706	1349 aa	Known RBP	4.09	□□□□□ -1.75
SNM1	YDR478W	YBR121C-A	P0C5L4	52 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	YMR31	P19955	123 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	ISY1	P21374	235 aa	Predicted RBP	4.08	□□□□□ -1.76
SNM1	YDR478W	VPH2	P32341	215 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	KDX1	P36005	433 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SNM1	YDR478W	GPI18	P38211	433 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	ERG28	P40030	148 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	NBP35	P52920	328 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	CUS2	P53830	285 aa	Predicted RBP	4.08	□□□□□ -1.76
SNM1	YDR478W	RHO3	Q00245	231 aa	Known RBP	4.08	□□□□□ -1.76
SNM1	YDR478W	ARC18	Q05933	178 aa	Known RBP	4.08	□□□□□ -1.76
SNM1	YDR478W	TLG2	Q08144	397 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	RRS1	Q08746	203 aa	Known RBP	4.08	□□□□□ -1.76
SNM1	YDR478W	AI5_BETA	Q9ZZX0	354 aa		4.08	□□□□□ -1.76
SNM1	YDR478W	RPL4A	P10664	362 aa	Known RBP	4.07	□□□□□ -1.76
SNM1	YDR478W	EPT1	P22140	391 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	YCR102C	P25608	368 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	ATG15	P25641	520 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	YHB1	P39676	399 aa	Known RBP	4.07	□□□□□ -1.76
SNM1	YDR478W	YRB2	P40517	327 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	YFL064C	P43540	174 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	HAM1	P47119	197 aa	Known RBP	4.07	□□□□□ -1.76
SNM1	YDR478W	RPL4B	P49626	362 aa	Known RBP	4.07	□□□□□ -1.76
SNM1	YDR478W	PRP24	P49960	444 aa	Known RBP	4.07	□□□□□ -1.76
SNM1	YDR478W	LIF1	P53150	421 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	VHS1	Q03785	461 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	YDR018C	Q12185	396 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	TRM10	Q12400	293 aa		4.07	□□□□□ -1.76
SNM1	YDR478W	COX4	P04037	155 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	YPK2	P18961	677 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	SSO1	P32867	290 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	SGE1	P33335	543 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	YIL012W	P40551	113 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	YPL113C	Q02961	396 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	SDC1	Q03323	175 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	INP1	Q03694	420 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	DIB1	Q06819	143 aa	Predicted RBP	4.06	□□□□□ -1.76
SNM1	YDR478W	YRA1	Q12159	226 aa	Known RBP	4.06	□□□□□ -1.76
SNM1	YDR478W	YKL183C-A	Q3E765	70 aa		4.06	□□□□□ -1.76
SNM1	YDR478W	YCR025C	P25352	136 aa		4.05	□□□□□ -1.76
SNM1	YDR478W	CAT2	P32796	670 aa	Known RBP	4.05	□□□□□ -1.76
SNM1	YDR478W	YNL194C	P40169	301 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms