RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	OMA1	P36163	345 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	YHR210C	P38893	341 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	AXL2	P38928	823 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	YEL057C	P39983	233 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	RRG9	P40156	214 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	KTR7	P40504	517 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	PAU15	P40585	124 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	YJL163C	P46996	555 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	BUL1	P48524	976 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	VPS73	P53142	486 aa	Known RBP	4.8	□□□□□ -1.64
DBF4	YDR052C	YAP1802	P53309	568 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	FPK1	P53739	893 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	CTF19	Q02732	369 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	MCA1	Q08601	432 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	GPB1	Q08886	897 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	NBP2	Q12163	236 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	SFG1	Q12507	346 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	CYC7	P00045	113 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YML003W	P0CF16	290 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	APE1	P14904	514 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	SCL1	P21243	252 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	BOS1	P25385	244 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YCL068C	P25593	260 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	UTR2	P32623	467 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	RTC2	P38279	296 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	GPI16	P38875	610 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	MET30	P39014	640 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	COA1	P40452	197 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	FMC1	P40491	155 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	LYS12	P40495	371 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	EMC5	P40540	141 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	FET4	P40988	552 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	HMS2	P47175	358 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	ASI3	P53983	676 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YDR132C	Q03900	495 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YMR087W	Q04299	284 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	EMI1	Q04406	187 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	FIT1	Q04433	528 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	PIN3	Q06449	215 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	RKI1	Q12189	258 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	MDY2	Q12285	212 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	PRR2	Q12310	699 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	NDJ1	Q12366	352 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	HIS1	P00498	297 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	SAM1	P10659	382 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	LSB5	P25369	354 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YBR063C	P38083	404 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	LSM2	P38203	95 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	CHL4	P38907	458 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	SNU13	P39990	126 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	RIB4	P50861	169 aa	Predicted RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	YNL018C	P53976	612 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	CDC55	Q00362	526 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	RSM23	Q01163	450 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	DYN2	Q02647	92 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	RSM10	Q03201	203 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YML018C	Q03730	393 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	HPT1	Q04178	221 aa	Known RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	AVO2	Q04749	426 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	NUT2	Q06213	157 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	GUD1	Q07729	489 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YLR030W	Q07967	263 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	SRL2	Q12020	392 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	TIR4	Q12218	487 aa	Predicted RBP	4.79	□□□□□ -1.64
DBF4	YDR052C	YOL114C	Q12322	202 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	SNF8	Q12483	233 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	YKL033W-A	Q86ZR7	236 aa		4.79	□□□□□ -1.64
DBF4	YDR052C	MES1	P00958	751 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	PUT1	P09368	476 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	IMG2	P25642	146 aa	Predicted RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	YCR090C	P25654	182 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	QDR3	P38227	689 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	TSL1	P38427	1098 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	HEM14	P40012	539 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YGR149W	P48236	432 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	EXG2	P52911	562 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	DUO1	P53168	247 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	PNC1	P53184	216 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	YIF1	P53845	314 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	PEX29	Q03370	554 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	ECM18	Q04623	453 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	ADH6	Q04894	360 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	DAL4	Q04895	635 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	IPK1	Q06667	281 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	HEM25	Q07534	307 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	GRE1	Q08969	168 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YLL056C	Q12177	298 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	WTM2	Q12206	467 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	TIF6	Q12522	245 aa	Known RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	PUT3	P25502	979 aa	Predicted RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	ARE1	P25628	610 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	TIP1	P27654	210 aa	Predicted RBP	4.78	□□□□□ -1.64
DBF4	YDR052C	UGX2	P32772	223 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	TIP20	P33891	701 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	POP8	P38208	133 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	LDB7	P38210	180 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YHL044W	P38727	235 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	WSS1	P38838	269 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	YHR177W	P38867	453 aa		4.78	□□□□□ -1.64
DBF4	YDR052C	FAA3	P39002	694 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms