RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C NIF3P53081 288 aa1□□□□□ -2.25
VAM6YDL077C MDM34P53083 459 aa1□□□□□ -2.25
VAM6YDL077C VPS62P53285 467 aa1□□□□□ -2.25
VAM6YDL077C GTR2P53290 341 aa1□□□□□ -2.25
VAM6YDL077C YAP1802P53309 568 aa1□□□□□ -2.25
VAM6YDL077C YGR283CP53336 341 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C FMP41P53889 259 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C AAH1P53909 347 aa1□□□□□ -2.25
VAM6YDL077C GPI15P53961 229 aa1□□□□□ -2.25
VAM6YDL077C SAM50P53969 484 aa1□□□□□ -2.25
VAM6YDL077C HXT15P54854 567 aa1□□□□□ -2.25
VAM6YDL077C APS2Q00381 147 aa1□□□□□ -2.25
VAM6YDL077C CYT2Q00873 224 aa1□□□□□ -2.25
VAM6YDL077C STD1Q02794 444 aa1□□□□□ -2.25
VAM6YDL077C UBP16Q02863 499 aa1□□□□□ -2.25
VAM6YDL077C PLB2Q03674 706 aa1□□□□□ -2.25
VAM6YDL077C LRS4Q04087 347 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C TRM12Q04235 462 aa1□□□□□ -2.25
VAM6YDL077C GRX8Q05926 109 aa1□□□□□ -2.25
VAM6YDL077C CNL1Q06333 122 aa1□□□□□ -2.25
VAM6YDL077C LOA1Q06508 300 aa1□□□□□ -2.25
VAM6YDL077C GPI11Q06636 219 aa1□□□□□ -2.25
VAM6YDL077C LDB18Q07887 179 aa1□□□□□ -2.25
VAM6YDL077C YLR036CQ07986 203 aa1□□□□□ -2.25
VAM6YDL077C YDR056CQ12025 205 aa1□□□□□ -2.25
VAM6YDL077C SRO7Q12038 1033 aa1□□□□□ -2.25
VAM6YDL077C UBX3Q12229 455 aa1□□□□□ -2.25
VAM6YDL077C VAM3Q12241 283 aa1□□□□□ -2.25
VAM6YDL077C SUL2Q12325 893 aa1□□□□□ -2.25
VAM6YDL077C JLP1Q12358 412 aa1□□□□□ -2.25
VAM6YDL077C ATG5Q12380 294 aa1□□□□□ -2.25
VAM6YDL077C GEP5Q12393 293 aa1□□□□□ -2.25
VAM6YDL077C SRN2Q99176 213 aa1□□□□□ -2.25
VAM6YDL077C YRF1-3P0CX14 1859 aa1□□□□□ -2.25
VAM6YDL077C YRF1-7P0CX15 1859 aa1□□□□□ -2.25
VAM6YDL077C YRF1-6P53819 1859 aa1□□□□□ -2.25
VAM6YDL077C PEP4P07267 405 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C PUT2P07275 575 aa1□□□□□ -2.25
VAM6YDL077C CHO1P08456 276 aa1□□□□□ -2.25
VAM6YDL077C SPS4P09937 338 aa1□□□□□ -2.25
VAM6YDL077C YML003WP0CF16 290 aa1□□□□□ -2.25
VAM6YDL077C YEL076C-AP0CX16 216 aa1□□□□□ -2.25
VAM6YDL077C YLR464WP0CX17 216 aa1□□□□□ -2.25
VAM6YDL077C YER152CP10356 443 aa1□□□□□ -2.25
VAM6YDL077C CDC34P14682 295 aa1□□□□□ -2.25
VAM6YDL077C ERD2P18414 219 aa1□□□□□ -2.25
VAM6YDL077C VBA3P25594 458 aa1□□□□□ -2.25
VAM6YDL077C YCR102CP25608 368 aa1□□□□□ -2.25
VAM6YDL077C PPA2P28239 310 aa1□□□□□ -2.25
VAM6YDL077C URA10P30402 227 aa1□□□□□ -2.25
VAM6YDL077C HOM6P31116 359 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C UGA4P32837 571 aa1□□□□□ -2.25
VAM6YDL077C MSN4P33749 630 aa1□□□□□ -2.25
VAM6YDL077C TSA1P34760 196 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C GCS1P35197 352 aa1□□□□□ -2.25
VAM6YDL077C YBR013CP38215 129 aa1□□□□□ -2.25
VAM6YDL077C ZTA1P38230 334 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C AIM3P38266 947 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C ATG12P38316 186 aa1□□□□□ -2.25
VAM6YDL077C CUE1P38428 203 aa1□□□□□ -2.25
VAM6YDL077C MGE1P38523 228 aa1□□□□□ -2.25
VAM6YDL077C EFM1P38732 585 aa1□□□□□ -2.25
VAM6YDL077C PPE1P38796 400 aa1□□□□□ -2.25
VAM6YDL077C ARO9P38840 513 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C CKB2P38930 258 aa1□□□□□ -2.25
VAM6YDL077C YEL076CP39971 216 aa1□□□□□ -2.25
VAM6YDL077C RFC4P40339 323 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C QDR1P40475 563 aa1□□□□□ -2.25
VAM6YDL077C YIL054WP40524 105 aa1□□□□□ -2.25
VAM6YDL077C MSL1P40567 111 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C YFL052WP43551 465 aa1□□□□□ -2.25
VAM6YDL077C RMD8P43620 662 aa1□□□□□ -2.25
VAM6YDL077C YHC3P47040 408 aa1□□□□□ -2.25
VAM6YDL077C IKS1P47042 667 aa1□□□□□ -2.25
VAM6YDL077C GPI14P47088 403 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YJR124CP47159 448 aa1□□□□□ -2.25
VAM6YDL077C YDL186WP48568 277 aa1□□□□□ -2.25
VAM6YDL077C LYS20P48570 428 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C RPS12P48589 143 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C ASN1P49089 572 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C SUT1P53032 299 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C SDT1P53078 280 aa1□□□□□ -2.25
VAM6YDL077C PIB2P53191 635 aa1□□□□□ -2.25
VAM6YDL077C YGR122WP53272 402 aa1□□□□□ -2.25
VAM6YDL077C BIO4P53630 237 aa1□□□□□ -2.25
VAM6YDL077C YNR029CP53729 429 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C ATG4P53867 494 aa1□□□□□ -2.25
VAM6YDL077C TPS1Q00764 495 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C ARG5,6Q01217 863 aa1□□□□□ -2.25
VAM6YDL077C NUP49Q02199 472 aa1□□□□□ -2.25
VAM6YDL077C CTF19Q02732 369 aa1□□□□□ -2.25
VAM6YDL077C ELC1Q03071 99 aa1□□□□□ -2.25
VAM6YDL077C RCE1Q03530 315 aa1□□□□□ -2.25
VAM6YDL077C YDR132CQ03900 495 aa1□□□□□ -2.25
VAM6YDL077C RUB1Q03919 77 aa1□□□□□ -2.25
VAM6YDL077C HNT1Q04344 158 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C PAL1Q05518 499 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YLR225CQ05948 407 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C NOC4Q06512 552 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C CYK3Q07533 885 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms