RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C TPS2P31688 896 aaKnown RBP3.56□□□□□ -1.84
NPL4YBR170C ALK2P32789 676 aaPredicted RBP3.56□□□□□ -1.84
NPL4YBR170C JEN1P36035 616 aa3.56□□□□□ -1.84
NPL4YBR170C BMT2P38278 337 aa3.56□□□□□ -1.84
NPL4YBR170C RMI1Q02685 241 aa3.56□□□□□ -1.84
NPL4YBR170C CTF19Q02732 369 aa3.56□□□□□ -1.84
NPL4YBR170C YKL183C-AQ3E765 70 aa3.56□□□□□ -1.84
NPL4YBR170C POX1P13711 748 aa3.55□□□□□ -1.84
NPL4YBR170C YPK2P18961 677 aa3.55□□□□□ -1.84
NPL4YBR170C YCR102CP25608 368 aa3.55□□□□□ -1.84
NPL4YBR170C ATG15P25641 520 aa3.55□□□□□ -1.84
NPL4YBR170C FRM2P37261 193 aa3.55□□□□□ -1.84
NPL4YBR170C YBR096WP38256 230 aa3.55□□□□□ -1.84
NPL4YBR170C EFM1P38732 585 aa3.55□□□□□ -1.84
NPL4YBR170C UTP18P40362 594 aaPredicted RBP3.55□□□□□ -1.84
NPL4YBR170C MRX11Q03079 207 aa3.55□□□□□ -1.84
NPL4YBR170C YDR115WQ04598 105 aa3.55□□□□□ -1.84
NPL4YBR170C YPL119C-AQ3E751 87 aa3.55□□□□□ -1.84
NPL4YBR170C YBR121C-AP0C5L4 52 aa3.54□□□□□ -1.84
NPL4YBR170C YCR025CP25352 136 aa3.54□□□□□ -1.84
NPL4YBR170C SHE3P38272 425 aaKnown RBP3.54□□□□□ -1.84
NPL4YBR170C YER034WP40022 185 aaKnown RBP3.54□□□□□ -1.84
NPL4YBR170C RFC4P40339 323 aaKnown RBP3.54□□□□□ -1.84
NPL4YBR170C YRB2P40517 327 aa3.54□□□□□ -1.84
NPL4YBR170C GAB1P41733 394 aa3.54□□□□□ -1.84
NPL4YBR170C MEP2P41948 499 aa3.54□□□□□ -1.84
NPL4YBR170C LIP2Q06005 328 aa3.54□□□□□ -1.84
NPL4YBR170C SWD3P38123 315 aa3.53□□□□□ -1.84
NPL4YBR170C MRP21P38175 177 aa3.53□□□□□ -1.84
NPL4YBR170C IGD1P43598 195 aa3.53□□□□□ -1.84
NPL4YBR170C COG7P53195 279 aa3.53□□□□□ -1.84
NPL4YBR170C YMR226CQ05016 267 aaKnown RBP3.53□□□□□ -1.84
NPL4YBR170C CLP1Q08685 445 aaPredicted RBP3.53□□□□□ -1.84
NPL4YBR170C YDR018CQ12185 396 aa3.53□□□□□ -1.84
NPL4YBR170C TPI1P00942 248 aaKnown RBP3.53□□□□□ -1.85
NPL4YBR170C RPL4AP10664 362 aaKnown RBP3.53□□□□□ -1.85
NPL4YBR170C CAB3P36076 571 aa3.53□□□□□ -1.85
NPL4YBR170C RFT1P38206 574 aaPredicted RBP3.53□□□□□ -1.85
NPL4YBR170C MED8P38304 223 aa3.53□□□□□ -1.85
NPL4YBR170C COX15P40086 486 aa3.53□□□□□ -1.85
NPL4YBR170C YNL194CP40169 301 aa3.53□□□□□ -1.85
NPL4YBR170C AVT7P40501 490 aa3.53□□□□□ -1.85
NPL4YBR170C RPL4BP49626 362 aaKnown RBP3.53□□□□□ -1.85
NPL4YBR170C CWC23P52868 283 aaPredicted RBP3.53□□□□□ -1.85
NPL4YBR170C FMP48P53233 369 aa3.53□□□□□ -1.85
NPL4YBR170C SDC1Q03323 175 aa3.53□□□□□ -1.85
NPL4YBR170C YMR166CQ03829 368 aa3.53□□□□□ -1.85
NPL4YBR170C RRG7Q08774 242 aaPredicted RBP3.53□□□□□ -1.85
NPL4YBR170C YPL278CQ08990 100 aa3.53□□□□□ -1.85
NPL4YBR170C SNU23Q12368 194 aaPredicted RBP3.53□□□□□ -1.85
NPL4YBR170C AI5_BETAQ9ZZX0 354 aa3.53□□□□□ -1.85
NPL4YBR170C ASP3-2P0CX77 362 aa3.52□□□□□ -1.85
NPL4YBR170C ASP3-3P0CX78 362 aa3.52□□□□□ -1.85
NPL4YBR170C ASP3-4P0CX79 362 aa3.52□□□□□ -1.85
NPL4YBR170C ASP3-1P0CZ17 362 aa3.52□□□□□ -1.85
NPL4YBR170C APA2P22108 325 aa3.52□□□□□ -1.85
NPL4YBR170C TIP20P33891 701 aa3.52□□□□□ -1.85
NPL4YBR170C SEN34P39707 275 aa3.52□□□□□ -1.85
NPL4YBR170C YPI1P43587 155 aa3.52□□□□□ -1.85
NPL4YBR170C IMP4P53941 290 aaKnown RBP3.52□□□□□ -1.85
NPL4YBR170C RPL21AQ02753 160 aaKnown RBP3.52□□□□□ -1.85
NPL4YBR170C YPR098CQ06089 161 aa3.52□□□□□ -1.85
NPL4YBR170C TLG2Q08144 397 aa3.52□□□□□ -1.85
NPL4YBR170C SRO7Q12038 1033 aa3.52□□□□□ -1.85
NPL4YBR170C HRT3Q12347 344 aa3.52□□□□□ -1.85
NPL4YBR170C MATALPHA2P0CY08 210 aa3.51□□□□□ -1.85
NPL4YBR170C HMLALPHA2P0CY09 210 aa3.51□□□□□ -1.85
NPL4YBR170C TAF14P35189 244 aa3.51□□□□□ -1.85
NPL4YBR170C YKL075CP36083 450 aa3.51□□□□□ -1.85
NPL4YBR170C MRPL3P36516 390 aa3.51□□□□□ -1.85
NPL4YBR170C HEK2P38199 381 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
NPL4YBR170C CUE1P38428 203 aa3.51□□□□□ -1.85
NPL4YBR170C GGC1P38988 300 aa3.51□□□□□ -1.85
NPL4YBR170C YPL113CQ02961 396 aa3.51□□□□□ -1.85
NPL4YBR170C COQ10Q08058 207 aa3.51□□□□□ -1.85
NPL4YBR170C RRS1Q08746 203 aaKnown RBP3.51□□□□□ -1.85
NPL4YBR170C YRA1Q12159 226 aaKnown RBP3.51□□□□□ -1.85
NPL4YBR170C YMR316C-AI2HB70 103 aa3.5□□□□□ -1.85
NPL4YBR170C ISY1P21374 235 aaPredicted RBP3.5□□□□□ -1.85
NPL4YBR170C GOS1P38736 223 aa3.5□□□□□ -1.85
NPL4YBR170C KRE29P40026 464 aa3.5□□□□□ -1.85
NPL4YBR170C YFL064CP43540 174 aa3.5□□□□□ -1.85
NPL4YBR170C API2Q04413 109 aa3.5□□□□□ -1.85
NPL4YBR170C CDC123Q05791 360 aa3.5□□□□□ -1.85
NPL4YBR170C PLB3Q08108 686 aa3.5□□□□□ -1.85
NPL4YBR170C RFM1Q12192 310 aa3.5□□□□□ -1.85
NPL4YBR170C YDR157WA0A023PZE8 133 aa3.5□□□□□ -1.85
NPL4YBR170C CBF1P17106 351 aa3.5□□□□□ -1.85
NPL4YBR170C OSM1P21375 501 aaKnown RBP3.5□□□□□ -1.85
NPL4YBR170C CAM1P29547 415 aaKnown RBP3.5□□□□□ -1.85
NPL4YBR170C VPH2P32341 215 aa3.5□□□□□ -1.85
NPL4YBR170C FZO1P38297 855 aa3.5□□□□□ -1.85
NPL4YBR170C RRG9P40156 214 aa3.5□□□□□ -1.85
NPL4YBR170C FMP41P53889 259 aaKnown RBP3.5□□□□□ -1.85
NPL4YBR170C INP1Q03694 420 aa3.5□□□□□ -1.85
NPL4YBR170C VHS1Q03785 461 aa3.5□□□□□ -1.85
NPL4YBR170C YMR244WQ04018 355 aa3.5□□□□□ -1.85
NPL4YBR170C WTM1Q12363 437 aaKnown RBP3.5□□□□□ -1.85
NPL4YBR170C TRM10Q12400 293 aa3.5□□□□□ -1.85
NPL4YBR170C CDC10P25342 322 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms