RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	YPL039W	Q03080	316 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	VPS60	Q03390	229 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	YMR166C	Q03829	368 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	SPO77	Q06134	477 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	LOA1	Q06508	300 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	SUE1	Q06524	206 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	IBA57	P47158	497 aa		2.48	□□□□□ -2.01
UBS1	YBR165W	NOT5	Q12514	560 aa	Predicted RBP	2.48	□□□□□ -2.01
UBS1	YBR165W	YEL009C-A	A0A023PZF2	135 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	BMH1	P29311	267 aa	Known RBP	2.47	□□□□□ -2.01
UBS1	YBR165W	CSG2	P35206	410 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	OSW5	P40219	148 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	YIA6	P40556	373 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	SDC1	Q03323	175 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	REX3	Q12090	404 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	YPL150W	Q12152	901 aa		2.47	□□□□□ -2.01
UBS1	YBR165W	SCO1	P23833	295 aa		2.46	□□□□□ -2.02
UBS1	YBR165W	KRR1	P25586	316 aa	Predicted RBP	2.46	□□□□□ -2.02
UBS1	YBR165W	YHR045W	P38775	560 aa		2.46	□□□□□ -2.02
UBS1	YBR165W	COG3	P40094	801 aa		2.46	□□□□□ -2.02
UBS1	YBR165W	FMP41	P53889	259 aa	Known RBP	2.46	□□□□□ -2.02
UBS1	YBR165W	GPN3	Q06543	272 aa		2.46	□□□□□ -2.02
UBS1	YBR165W	BER1	Q06688	274 aa	Known RBP	2.46	□□□□□ -2.02
UBS1	YBR165W	GPI12	P23797	304 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	NRG2	P38082	220 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	HIS2	P38635	335 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	POP2	P39008	433 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	DAN1	P47178	298 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	KEL2	P50090	882 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	CAB4	P53332	305 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	COS6	P53344	381 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	YOL019W	Q08157	551 aa		2.45	□□□□□ -2.02
UBS1	YBR165W	HMT1	P38074	348 aa		2.44	□□□□□ -2.02
UBS1	YBR165W	ARN2	P38724	620 aa		2.44	□□□□□ -2.02
UBS1	YBR165W	TDA11	P38854	504 aa		2.44	□□□□□ -2.02
UBS1	YBR165W	ECM18	Q04623	453 aa		2.44	□□□□□ -2.02
UBS1	YBR165W	POM33	Q12164	279 aa		2.44	□□□□□ -2.02
UBS1	YBR165W	SMT3	Q12306	101 aa	Known RBP	2.44	□□□□□ -2.02
UBS1	YBR165W	YMR316C-A	I2HB70	103 aa		2.43	□□□□□ -2.02
UBS1	YBR165W	ILV1	P00927	576 aa	Known RBP	2.43	□□□□□ -2.02
UBS1	YBR165W	MRPL49	P40858	161 aa	Predicted RBP	2.43	□□□□□ -2.02
UBS1	YBR165W	YJL016W	P47072	561 aa		2.43	□□□□□ -2.02
UBS1	YBR165W	BAT2	P47176	376 aa	Known RBP	2.43	□□□□□ -2.02
UBS1	YBR165W	SPO19	Q03029	223 aa		2.43	□□□□□ -2.02
UBS1	YBR165W	YAL064W-B	O13512	126 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	RAD10	P06838	210 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	COS2	P0CX12	379 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	COS3	P0CX13	379 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	CAM1	P29547	415 aa	Known RBP	2.42	□□□□□ -2.02
UBS1	YBR165W	SPT8	P38915	602 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	SLM2	P53955	656 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	TRM44	Q02648	567 aa	Known RBP	2.42	□□□□□ -2.02
UBS1	YBR165W	DCR2	Q05924	578 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	BCP1	Q06338	283 aa		2.42	□□□□□ -2.02
UBS1	YBR165W	RPS3	P05750	240 aa	Known RBP	2.41	□□□□□ -2.02
UBS1	YBR165W	EMC6	Q12431	108 aa		2.41	□□□□□ -2.02
UBS1	YBR165W	TDH1	P00360	332 aa	Known RBP	2.4	□□□□□ -2.03
UBS1	YBR165W	UGA1	P17649	471 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	CSM1	P25651	190 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	PEX3	P28795	441 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	DRE2	P36152	348 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.4	□□□□□ -2.03	not detected
UBS1	YBR165W	YMR114C	Q04471	368 aa	Known RBP	2.4	□□□□□ -2.03
UBS1	YBR165W	SEC10	Q06245	871 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	YPL247C	Q12523	523 aa		2.4	□□□□□ -2.03
UBS1	YBR165W	SFC1	P33303	322 aa		2.39	□□□□□ -2.03
UBS1	YBR165W	GDH2	P33327	1092 aa	Known RBP	2.39	□□□□□ -2.03
UBS1	YBR165W	FCY21	P40039	528 aa		2.39	□□□□□ -2.03
UBS1	YBR165W	TIF34	P40217	347 aa	Known RBP	2.39	□□□□□ -2.03
UBS1	YBR165W	YNL260C	P53846	198 aa		2.39	□□□□□ -2.03
UBS1	YBR165W	STF1	P01098	86 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	ADH3	P07246	375 aa	Known RBP	2.38	□□□□□ -2.03
UBS1	YBR165W	FRS2	P15625	503 aa	Known RBP	2.38	□□□□□ -2.03
UBS1	YBR165W	DPB2	P24482	689 aa	Predicted RBP	2.38	□□□□□ -2.03
UBS1	YBR165W	SER33	P40510	469 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	AGX1	P43567	385 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	PEX31	P53203	462 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	CPD1	P53314	239 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	YNL050C	P53952	270 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	VBA1	Q04301	562 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	ERV41	Q04651	352 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	MDY2	Q12285	212 aa		2.38	□□□□□ -2.03
UBS1	YBR165W	PPH21	P23594	369 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	YHL026C	P38740	315 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	TEM1	P38987	245 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	GON7	P46984	123 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	SFH1	Q06168	426 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	YOS9	Q99220	542 aa		2.37	□□□□□ -2.03
UBS1	YBR165W	NPT1	P39683	429 aa	Known RBP	2.36	□□□□□ -2.03
UBS1	YBR165W	GCD14	P46959	383 aa	Predicted RBP	2.36	□□□□□ -2.03
UBS1	YBR165W	PNC1	P53184	216 aa	Known RBP	2.36	□□□□□ -2.03
UBS1	YBR165W	RPC40	P07703	335 aa	Known RBP	2.35	□□□□□ -2.03
UBS1	YBR165W	RPL4A	P10664	362 aa	Known RBP	2.35	□□□□□ -2.03
UBS1	YBR165W	ICL1	P28240	557 aa	Predicted RBP	2.35	□□□□□ -2.03
UBS1	YBR165W	YJL027C	P47063	138 aa	Predicted RBP	2.35	□□□□□ -2.03
UBS1	YBR165W	RPL4B	P49626	362 aa	Known RBP	2.35	□□□□□ -2.03
UBS1	YBR165W	NIF3	P53081	288 aa		2.35	□□□□□ -2.03
UBS1	YBR165W	ATC1	Q04005	294 aa		2.35	□□□□□ -2.03
UBS1	YBR165W	AI5_BETA	Q9ZZX0	354 aa		2.35	□□□□□ -2.03
UBS1	YBR165W	YOR062C	P36025	268 aa		2.34	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 284.4 ms