RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PGU1P47180 361 aa1.72□□□□□ -2.13
SNC1YAL030W HSH155P49955 971 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W NBP35P52920 328 aa1.72□□□□□ -2.13
SNC1YAL030W YGL262WP53054 175 aa1.72□□□□□ -2.13
SNC1YAL030W USE1P53146 245 aa1.72□□□□□ -2.13
SNC1YAL030W CGR1P53188 120 aa1.72□□□□□ -2.13
SNC1YAL030W FMP48P53233 369 aa1.72□□□□□ -2.13
SNC1YAL030W ASI3P53983 676 aa1.72□□□□□ -2.13
SNC1YAL030W MRPS16Q02608 121 aa1.72□□□□□ -2.13
SNC1YAL030W GTO3Q04806 366 aa1.72□□□□□ -2.13
SNC1YAL030W SPO77Q06134 477 aa1.72□□□□□ -2.13
SNC1YAL030W DXO1Q06349 442 aa1.72□□□□□ -2.13
SNC1YAL030W ATG17Q06410 417 aa1.72□□□□□ -2.13
SNC1YAL030W DFM1Q12743 341 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W NCB2Q92317 146 aa1.72□□□□□ -2.13
SNC1YAL030W YOL085CQ99345 113 aa1.72□□□□□ -2.13
SNC1YAL030W AI5_BETAQ9ZZX0 354 aa1.72□□□□□ -2.13
SNC1YAL030W YMR316C-AI2HB70 103 aa1.71□□□□□ -2.14
SNC1YAL030W MATALPHA1P0CY06 175 aa1.71□□□□□ -2.14
SNC1YAL030W HMLALPHA1P0CY07 175 aa1.71□□□□□ -2.14
SNC1YAL030W RPL4AP10664 362 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W OSM1P21375 501 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W MRPL25P23369 157 aa1.71□□□□□ -2.14
SNC1YAL030W LDB16P25587 256 aa1.71□□□□□ -2.14
SNC1YAL030W CAM1P29547 415 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W QRI5P32344 111 aa1.71□□□□□ -2.14
SNC1YAL030W VMA6P32366 345 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W MRP21P38175 177 aa1.71□□□□□ -2.14
SNC1YAL030W FZO1P38297 855 aa1.71□□□□□ -2.14
SNC1YAL030W SEN34P39707 275 aa1.71□□□□□ -2.14
SNC1YAL030W RRT13P40042 185 aa1.71□□□□□ -2.14
SNC1YAL030W YIL054WP40524 105 aa1.71□□□□□ -2.14
SNC1YAL030W UFE1P41834 346 aa1.71□□□□□ -2.14
SNC1YAL030W JHD2P47156 728 aaPredicted RBP1.71□□□□□ -2.14
SNC1YAL030W RPL4BP49626 362 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W PRP24P49960 444 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W NBP1P52919 319 aaPredicted RBP1.71□□□□□ -2.14
SNC1YAL030W ACT1P60010 375 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W YPL113CQ02961 396 aa1.71□□□□□ -2.14
SNC1YAL030W INP1Q03694 420 aa1.71□□□□□ -2.14
SNC1YAL030W UTP15Q04305 513 aaKnown RBP1.71□□□□□ -2.14
SNC1YAL030W SCW10Q04951 389 aa1.71□□□□□ -2.14
SNC1YAL030W LOA1Q06508 300 aa1.71□□□□□ -2.14
SNC1YAL030W MCH1Q07376 486 aa1.71□□□□□ -2.14
SNC1YAL030W YPL278CQ08990 100 aa1.71□□□□□ -2.14
SNC1YAL030W YCT1Q12235 531 aa1.71□□□□□ -2.14
SNC1YAL030W SNU23Q12368 194 aaPredicted RBP1.71□□□□□ -2.14
SNC1YAL030W RAX2Q12465 1220 aa1.71□□□□□ -2.14
SNC1YAL030W SEY1Q99287 776 aa1.71□□□□□ -2.14
SNC1YAL030W RHO1P06780 209 aaKnown RBP1.7□□□□□ -2.14
SNC1YAL030W ARG80P07249 177 aa1.7□□□□□ -2.14
SNC1YAL030W NHP6BP11633 99 aaKnown RBP1.7□□□□□ -2.14
SNC1YAL030W CKA2P19454 339 aa1.7□□□□□ -2.14
SNC1YAL030W PHO80P20052 293 aa1.7□□□□□ -2.14
SNC1YAL030W DPB2P24482 689 aaPredicted RBP1.7□□□□□ -2.14
SNC1YAL030W YCR025CP25352 136 aa1.7□□□□□ -2.14
SNC1YAL030W PBN1P25580 416 aa1.7□□□□□ -2.14
SNC1YAL030W PPA2P28239 310 aa1.7□□□□□ -2.14
SNC1YAL030W IMP1P28627 190 aa1.7□□□□□ -2.14
SNC1YAL030W ZRT3P34240 503 aa1.7□□□□□ -2.14
SNC1YAL030W VPS21P36017 210 aaKnown RBP1.7□□□□□ -2.14
SNC1YAL030W YKL075CP36083 450 aa1.7□□□□□ -2.14
SNC1YAL030W YHL044WP38727 235 aa1.7□□□□□ -2.14
SNC1YAL030W FRT2P39734 528 aa1.7□□□□□ -2.14
SNC1YAL030W EDC2P40023 145 aaPredicted RBP1.7□□□□□ -2.14
SNC1YAL030W AVT6P40074 448 aa1.7□□□□□ -2.14
SNC1YAL030W COX15P40086 486 aa1.7□□□□□ -2.14
SNC1YAL030W YJR079WP47126 109 aa1.7□□□□□ -2.14
SNC1YAL030W VEL1P53058 206 aa1.7□□□□□ -2.14
SNC1YAL030W SLX9P53251 210 aaPredicted RBP1.7□□□□□ -2.14
SNC1YAL030W HAL1Q01766 294 aa1.7□□□□□ -2.14
SNC1YAL030W MRPS17Q03246 237 aaPredicted RBP1.7□□□□□ -2.14
SNC1YAL030W EBS1Q03466 884 aaKnown RBP1.7□□□□□ -2.14
SNC1YAL030W BNA7Q04066 261 aa1.7□□□□□ -2.14
SNC1YAL030W ARC18Q05933 178 aaKnown RBP1.7□□□□□ -2.14
SNC1YAL030W ECM19Q06011 112 aa1.7□□□□□ -2.14
SNC1YAL030W YOL029CQ08187 201 aa1.7□□□□□ -2.14
SNC1YAL030W TMC1Q08422 150 aaPredicted RBP1.7□□□□□ -2.14
SNC1YAL030W RFM1Q12192 310 aa1.7□□□□□ -2.14
SNC1YAL030W YAL063C-AQ3E791 96 aa1.7□□□□□ -2.14
SNC1YAL030W YAL067W-AQ8TGK6 75 aa1.7□□□□□ -2.14
SNC1YAL030W SAC3P46674 1301 aa1.69□□□□□ -2.14
SNC1YAL030W RPS19AP07280 144 aaKnown RBP1.69□□□□□ -2.14
SNC1YAL030W RPS19BP07281 144 aaPredicted RBP1.69□□□□□ -2.14
SNC1YAL030W TCP1P12612 559 aaKnown RBP1.69□□□□□ -2.14
SNC1YAL030W POX1P13711 748 aa1.69□□□□□ -2.14
SNC1YAL030W COQ1P18900 473 aa1.69□□□□□ -2.14
SNC1YAL030W PCL1P24867 279 aa1.69□□□□□ -2.14
SNC1YAL030W EHD3P28817 500 aa1.69□□□□□ -2.14
SNC1YAL030W CAT2P32796 670 aaKnown RBP1.69□□□□□ -2.14
SNC1YAL030W JEN1P36035 616 aa1.69□□□□□ -2.14
SNC1YAL030W DBP7P36120 742 aaKnown RBP1.69□□□□□ -2.14
SNC1YAL030W MRPS9P38120 278 aa1.69□□□□□ -2.14
SNC1YAL030W HEK2P38199 381 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SNC1YAL030W POP8P38208 133 aa1.69□□□□□ -2.14
SNC1YAL030W SIP3P38717 1229 aa1.69□□□□□ -2.14
SNC1YAL030W GOS1P38736 223 aa1.69□□□□□ -2.14
SNC1YAL030W RTC3P38804 111 aaPredicted RBP1.69□□□□□ -2.14
SNC1YAL030W ASP1P38986 381 aaPredicted RBP1.69□□□□□ -2.14
SNC1YAL030W AVT7P40501 490 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 163.7 ms