RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C FMP23P38231 175 aa11.84□□□□□ -0.51
SSA1YAL005C NOP16P40007 231 aaKnown RBP11.84□□□□□ -0.51
SSA1YAL005C JLP2P40206 208 aa11.84□□□□□ -0.51
SSA1YAL005C BRE4Q07660 1125 aa11.84□□□□□ -0.51
SSA1YAL005C PRE7P23724 241 aaKnown RBP11.84□□□□□ -0.51
SSA1YAL005C UTP11P34247 250 aaPredicted RBP11.84□□□□□ -0.51
SSA1YAL005C SRP102P36057 244 aaPredicted RBP11.84□□□□□ -0.51
SSA1YAL005C PET191Q02772 108 aa11.84□□□□□ -0.51
SSA1YAL005C MRP51Q02950 344 aa11.84□□□□□ -0.51
SSA1YAL005C YMR265CQ03508 461 aaKnown RBP11.84□□□□□ -0.51
SSA1YAL005C MRL1Q06815 381 aa11.84□□□□□ -0.51
SSA1YAL005C EXG1P23776 448 aaKnown RBP11.83□□□□□ -0.52
SSA1YAL005C GIT1P25346 518 aa11.83□□□□□ -0.52
SSA1YAL005C RPC34P32910 317 aa11.83□□□□□ -0.52
SSA1YAL005C MTC6P38849 526 aa11.83□□□□□ -0.52
SSA1YAL005C PMT6P42934 759 aa11.83□□□□□ -0.52
SSA1YAL005C YGR054WP53235 642 aaKnown RBP11.83□□□□□ -0.52
SSA1YAL005C MRX8Q05473 314 aa11.83□□□□□ -0.52
SSA1YAL005C MCH4Q08268 501 aa11.83□□□□□ -0.52
SSA1YAL005C ATP3P38077 311 aaKnown RBP11.82□□□□□ -0.52
SSA1YAL005C GDS1P41913 522 aa11.82□□□□□ -0.52
SSA1YAL005C CGR1P53188 120 aa11.82□□□□□ -0.52
SSA1YAL005C IMO32P53219 342 aa11.82□□□□□ -0.52
SSA1YAL005C CPR8P53728 308 aa11.82□□□□□ -0.52
SSA1YAL005C SYC1Q08553 188 aaPredicted RBP11.82□□□□□ -0.52
SSA1YAL005C YLR099W-AQ3E798 87 aa11.82□□□□□ -0.52
SSA1YAL005C REP1P03871 373 aa11.82□□□□□ -0.52
SSA1YAL005C SIR2P06700 562 aa11.82□□□□□ -0.52
SSA1YAL005C PHO2P07269 559 aa11.82□□□□□ -0.52
SSA1YAL005C POP7P38291 140 aa11.82□□□□□ -0.52
SSA1YAL005C GPG1P53130 126 aa11.82□□□□□ -0.52
SSA1YAL005C SRL4Q03085 281 aa11.82□□□□□ -0.52
SSA1YAL005C BAG7Q12128 409 aa11.82□□□□□ -0.52
SSA1YAL005C PRS5Q12265 496 aaKnown RBP11.82□□□□□ -0.52
SSA1YAL005C ERG4P25340 473 aa11.81□□□□□ -0.52
SSA1YAL005C AHC2P25649 128 aa11.81□□□□□ -0.52
SSA1YAL005C PTH1P38876 190 aaKnown RBP11.81□□□□□ -0.52
SSA1YAL005C RMD9P53140 646 aaKnown RBP11.81□□□□□ -0.52
SSA1YAL005C AIM36Q03798 255 aa11.81□□□□□ -0.52
SSA1YAL005C MED2Q12124 431 aa11.81□□□□□ -0.52
SSA1YAL005C MSW1P04803 379 aa11.8□□□□□ -0.52
SSA1YAL005C SPO7P18410 259 aa11.8□□□□□ -0.52
SSA1YAL005C MEK1P24719 497 aaPredicted RBP11.8□□□□□ -0.52
SSA1YAL005C PCL1P24867 279 aa11.8□□□□□ -0.52
SSA1YAL005C PCP1P53259 346 aa11.8□□□□□ -0.52
SSA1YAL005C MRPL19P53875 158 aa11.8□□□□□ -0.52
SSA1YAL005C YDL180WQ12301 547 aa11.8□□□□□ -0.52
SSA1YAL005C NUM1Q00402 2748 aa11.8□□□□□ -0.52
SSA1YAL005C DPB11P47027 764 aaPredicted RBP11.8□□□□□ -0.52
SSA1YAL005C UBX6P47049 396 aa11.8□□□□□ -0.52
SSA1YAL005C CCC1P47818 322 aa11.8□□□□□ -0.52
SSA1YAL005C YAP1802P53309 568 aa11.8□□□□□ -0.52
SSA1YAL005C MRP1P10662 321 aaKnown RBP11.79□□□□□ -0.52
SSA1YAL005C MRPL39P36533 70 aa11.79□□□□□ -0.52
SSA1YAL005C SSY1Q03770 852 aa11.79□□□□□ -0.52
SSA1YAL005C NMA1Q06178 401 aaKnown RBP11.79□□□□□ -0.52
SSA1YAL005C RPS16AP0CX51 143 aaKnown RBP11.78□□□□□ -0.52
SSA1YAL005C RPS16BP0CX52 143 aaKnown RBP11.78□□□□□ -0.52
SSA1YAL005C CLB2P24869 491 aa11.78□□□□□ -0.52
SSA1YAL005C SED4P25365 1065 aa11.78□□□□□ -0.52
SSA1YAL005C YMR262WP38430 313 aa11.78□□□□□ -0.52
SSA1YAL005C MSS11Q03825 758 aa11.78□□□□□ -0.52
SSA1YAL005C DCP1Q12517 231 aaPredicted RBP11.78□□□□□ -0.52
SSA1YAL005C COX9P07255 59 aa11.78□□□□□ -0.52
SSA1YAL005C DBF2P22204 572 aa11.78□□□□□ -0.52
SSA1YAL005C ANR2P36090 516 aaPredicted RBP11.78□□□□□ -0.52
SSA1YAL005C GPP2P40106 250 aaKnown RBP11.78□□□□□ -0.52
SSA1YAL005C YIL077CP40508 320 aa11.78□□□□□ -0.52
SSA1YAL005C SLS1P42900 643 aa11.78□□□□□ -0.52
SSA1YAL005C PMT5P52867 743 aa11.78□□□□□ -0.52
SSA1YAL005C YDR514CQ04408 483 aa11.78□□□□□ -0.52
SSA1YAL005C YKL063CP35725 167 aa11.77□□□□□ -0.53
SSA1YAL005C XBP1P40489 647 aa11.77□□□□□ -0.53
SSA1YAL005C YML108WQ03759 105 aa11.77□□□□□ -0.53
SSA1YAL005C RTT103Q05543 409 aa11.77□□□□□ -0.53
SSA1YAL005C TIR4Q12218 487 aaPredicted RBP11.77□□□□□ -0.53
SSA1YAL005C CDC39P25655 2108 aaKnown RBP11.77□□□□□ -0.53
SSA1YAL005C DBP2P24783 546 aaKnown RBP11.76□□□□□ -0.53
SSA1YAL005C MTH1P35198 433 aa11.76□□□□□ -0.53
SSA1YAL005C GPI16P38875 610 aa11.76□□□□□ -0.53
SSA1YAL005C SLZ1P40167 298 aa11.76□□□□□ -0.53
SSA1YAL005C TIR3P40552 269 aa11.76□□□□□ -0.53
SSA1YAL005C LYS20P48570 428 aaKnown RBP11.76□□□□□ -0.53
SSA1YAL005C RVB1Q03940 463 aaKnown RBP11.76□□□□□ -0.53
SSA1YAL005C RAF1Q06891 181 aa11.76□□□□□ -0.53
SSA1YAL005C SSK1Q07084 712 aa11.76□□□□□ -0.53
SSA1YAL005C LYS21Q12122 440 aaKnown RBP11.76□□□□□ -0.53
SSA1YAL005C NPL6P32832 435 aa11.76□□□□□ -0.53
SSA1YAL005C ZRT3P34240 503 aa11.76□□□□□ -0.53
SSA1YAL005C SPT10P35208 640 aa11.76□□□□□ -0.53
SSA1YAL005C PEX27Q08580 376 aa11.76□□□□□ -0.53
SSA1YAL005C FOL3Q12676 427 aaPredicted RBP11.76□□□□□ -0.53
SSA1YAL005C CMC2Q3E7A4 109 aa11.76□□□□□ -0.53
SSA1YAL005C RPN13O13563 156 aa11.75□□□□□ -0.53
SSA1YAL005C SOD2P00447 233 aa11.75□□□□□ -0.53
SSA1YAL005C HIS3P06633 220 aa11.75□□□□□ -0.53
SSA1YAL005C ADK1P07170 222 aaKnown RBP11.75□□□□□ -0.53
SSA1YAL005C YNL165WP53891 406 aa11.75□□□□□ -0.53
SSA1YAL005C YAP6Q03935 383 aa11.75□□□□□ -0.53
SSA1YAL005C GPN3Q06543 272 aa11.75□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms