RNA–Protein interactions for RNA: ENST00000638462.1

AC055733.4-201, humanhuman

BASIC

Gene AC055733.4, Length 1,354 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.4-201ENST00000638462 ZBTB33Q86T24 672 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 NPAS4Q8IUM7 802 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 SYAP1Q96A49 352 aaPredicted RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 RNPC3Q96LT9 517 aaKnown RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 TCHPQ9BT92 498 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 NXF3Q9H4D5 531 aaKnown RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 HES2Q9Y543 173 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 SLC4A7Q9Y6M7 1214 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 PPP1R3GB7ZBB8 358 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 FAM189A1O60320 539 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 EOMESO95936 686 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 FXR1P51114 621 aaKnown RBP eCLIP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 SNRPFP62306 86 aaKnown RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 SLFN12LQ6IEE8 588 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 TMCO2Q7Z6W1 182 aaPredicted RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 CEP120Q8N960 986 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 PHOSPHO2Q8TCD6 241 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 TRIM6Q9C030 488 aaPredicted RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 RNF39Q9H2S5 420 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 AGPAT3Q9NRZ7 376 aa23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 TYW1Q9NV66 732 aaKnown RBP23.4■■□□□ 1.34
AC055733.4-201ENST00000638462 PTPRSQ13332 1948 aa23.39■■□□□ 1.34
AC055733.4-201ENST00000638462 MEIS3P2A8K0S8 358 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 PDXKO00764 312 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 GARTP22102 1010 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 ZCWPW2Q504Y3 356 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 AGMOQ6ZNB7 445 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 APBB1IPQ7Z5R6 666 aaPredicted RBP23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 SLC9A7Q96T83 725 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 CBWD1Q9BRT8 395 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 SEMA6BQ9H3T3 888 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 RNF19AQ9NV58 838 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 TRAF3IP3Q9Y228 551 aa23.39■■□□□ 1.33
AC055733.4-201ENST00000638462 LAMA3Q16787 3333 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 GRM5P41594 1212 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 CENPPQ6IPU0 288 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 C12orf56Q8IXR9 622 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 TMEM192Q8IY95 271 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 TMEM174Q8WUU8 243 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 LPPQ93052 612 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 CGNQ9P2M7 1197 aaKnown RBP23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 PCDHB7Q9Y5E2 793 aa23.38■■□□□ 1.33
AC055733.4-201ENST00000638462 OGTO15294 1046 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 STAG3L1P0CL83 205 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 HARSP12081 509 aaKnown RBP23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 ATP2A2P16615 1042 aaKnown RBP23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 PPP1R2P41236 205 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 NLRP12P59046 1061 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 HS2ST1Q7LGA3 356 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 THNSL1Q8IYQ7 743 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 POMGNT1Q8WZA1 660 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 MSTO1Q9BUK6 570 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 RC3H2Q9HBD1 1191 aaKnown RBP23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 RNF216Q9NWF9 866 aaPredicted RBP23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 SNTG2Q9NY99 539 aa23.37■■□□□ 1.33
AC055733.4-201ENST00000638462 CLIC2O15247 247 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 UPP2O95045 317 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 GJB5O95377 273 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 IBSPP21815 317 aaPredicted RBP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 MATR3P43243 847 aaKnown RBP eCLIP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 PMS1P54277 932 aaKnown RBP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 DPCR1Q3MIW9 517 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 SEZ6Q53EL9 994 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 ZBTB41Q5SVQ8 909 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 FAM109BQ6ICB4 259 aaPredicted RBP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 ARMCX5Q6P1M9 558 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 HERC6Q8IVU3 1022 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 MLKLQ8NB16 471 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 RNF169Q8NCN4 708 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 ZSWIM2Q8NEG5 633 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 GOLGA5Q8TBA6 731 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 PGBD4Q96DM1 585 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 DHTKD1Q96HY7 919 aaPredicted RBP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 DMAC2Q9NW81 257 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 AGO2Q9UKV8 859 aaKnown RBP23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 LRFN2Q9ULH4 789 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 TRIOBPQ9H2D6 2365 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 COL4A6Q14031 1691 aa23.36■■□□□ 1.33
AC055733.4-201ENST00000638462 PSMA7O14818 248 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 MEFVO15553 781 aaPredicted RBP23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 DGKIO75912 1065 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 FGFR1P11362 822 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 ITGA4P13612 1032 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 AKAP5P24588 427 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 STIM1Q13586 685 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 NFIL3Q16649 462 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 CLLU1OSQ5K130 101 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 CRELD2Q6UXH1 353 aaPredicted RBP23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 SLC9A9Q8IVB4 645 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 ZNF689Q96CS4 500 aaPredicted RBP23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 PCIF1Q9H4Z3 704 aa23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 COLQQ9Y215 455 aaPredicted RBP23.35■■□□□ 1.33
AC055733.4-201ENST00000638462 KIAA0391O15091 583 aaKnown RBP23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 RECQL4O94761 1208 aa23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 CCNE1P24864 410 aa23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 TNFSF9P41273 254 aa23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 OSTNP61366 133 aa23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 HTRA4P83105 476 aaPredicted RBP23.34■■□□□ 1.33
AC055733.4-201ENST00000638462 FAM117BQ6P1L5 589 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms