RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 KIAA1841Q6NSI8 718 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 TRMT10BQ6PF06 316 aaKnown RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 LRSAM1Q6UWE0 723 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 UNQ6494/PRO21346Q6UXR6 183 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 TMC5Q6UXY8 1006 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 ESPNLQ6ZVH7 1005 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 RALYLQ86SE5 291 aaKnown RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 REXO1L1PQ8IX06 675 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 PALM2Q8IXS6 379 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 SMAP1Q8IYB5 467 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 SPICE1Q8N0Z3 855 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 MYO1HQ8N1T3 1032 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 C7orf31Q8N865 590 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 HIPK4Q8NE63 616 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 TTC8Q8TAM2 541 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 ZCCHC14Q8WYQ9 949 aaKnown RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 HOOK2Q96ED9 719 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 ZSWIM3Q96MP5 696 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 SERINC2Q96SA4 455 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 SMAD5Q99717 465 aaKnown RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 MYL10Q9BUA6 226 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 BTBD2Q9BX70 525 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 POFUT1Q9H488 388 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 PRDM12Q9H4Q4 367 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 MSL2Q9HCI7 577 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 ZNF277Q9NRM2 450 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 KCND1Q9NSA2 647 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 UCKL1Q9NWZ5 548 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 TAGLN3Q9UI15 199 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 FBXO2Q9UK22 296 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-208ENST00000635562 CROTQ9UKG9 612 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 DENND2AQ9ULE3 1009 aa3.51□□□□□ -1.85
PSPC1-208ENST00000635562 A0A1W2PRQ8 180 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 PABPN1LA6NDY0 278 aaKnown RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ORC4O43929 436 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 B4GALT4O60513 344 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 HMMRO75330 724 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 RFPL1O75677 317 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 TCEA3O75764 348 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 SCGB1D2O95969 90 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 MT-CO1P00395 513 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CFBP00751 764 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 AMHP03971 560 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 MYBL2P10244 700 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 MLLT6P55198 1093 aaPredicted RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 SCAND1P57086 179 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 TGFB2P61812 414 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 IL13RA1P78552 427 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 GPSM2P81274 684 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 MRPS9P82933 396 aaKnown RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 SLC6A3Q01959 620 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ROM1Q03395 351 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ADCY2Q08462 1091 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ODF1Q14990 250 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 PRKD1Q15139 912 aaPredicted RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 PTPN21Q16825 1174 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ZNF568Q3ZCX4 644 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CT83Q5H943 113 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CRB2Q5IJ48 1285 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 PITRM1Q5JRX3 1037 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 KSR2Q6VAB6 950 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CXXC5Q7LFL8 322 aaKnown RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ZBTB46Q86UZ6 589 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 NBPF5PQ86XG9 351 aaPredicted RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 LMNTD2Q8IXW0 634 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 BCL6BQ8N143 479 aaPredicted RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 SSH1Q8WYL5 1049 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ERCC4Q92889 916 aaPredicted RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 CDHR1Q96JP9 859 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 TUBGCP5Q96RT8 1024 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 RHOBTB2Q9BYZ6 727 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 MEGF9Q9H1U4 602 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 OR10A5Q9H207 317 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 LUZP4Q9P127 313 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ARHGAP28Q9P2N2 729 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 PGAP2Q9UHJ9 254 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 ISY1Q9ULR0 285 aaKnown RBP3.5□□□□□ -1.85
PSPC1-208ENST00000635562 GTF2A1LQ9UNN4 478 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 RABGAP1Q9Y3P9 1069 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 SLC4A7Q9Y6M7 1214 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 NUMBLQ9Y6R0 609 aa3.5□□□□□ -1.85
PSPC1-208ENST00000635562 WDR33Q9C0J8 1336 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 A0A0A6YYJ9 748 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 PRSS47A8MTI9 375 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 CLEC2LP0C7M8 214 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 AGXTP21549 392 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 TSPAN7P41732 249 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 HTR3AP46098 478 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 GEMIN4P57678 1058 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 ABHD18Q0P651 414 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 WASHC5Q12768 1159 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 TRIM25Q14258 630 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 NOLC1Q14978 699 aaKnown RBP eCLIP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 TAF11Q15544 211 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 HSP90AB3PQ58FF7 597 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 FAM133BQ5BKY9 247 aaKnown RBP3.49□□□□□ -1.85
PSPC1-208ENST00000635562 SPDYAQ5MJ70 313 aa3.49□□□□□ -1.85
PSPC1-208ENST00000635562 PRAMEF9Q5VWM5 478 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms