RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 ZNF720Q7Z2F6 126 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 P2RX5Q93086 422 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 C11orf84Q9BUA3 381 aaPredicted RBP16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 TARS2Q9BW92 718 aaKnown RBP16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 CWH43Q9H720 699 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 SERTAD1Q9UHV2 236 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 USP20Q9Y2K6 914 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 HES2Q9Y543 173 aa16.18■□□□□ 0.18
CDC42BPB-209ENST00000634889 ARL5CA6NH57 179 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 H3BNC9 293 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 ABLIM1O14639 778 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 HNRNPDLO14979 420 aaKnown RBP16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 PPP1R37O75864 691 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 MCF2P10911 925 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 COASYQ13057 564 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 MYLIPQ8WY64 445 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 BICD1Q96G01 975 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 STRA6Q9BX79 667 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 CDT1Q9H211 546 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 GOLPH3LQ9H4A5 285 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 TBC1D13Q9NVG8 400 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 INPP5FQ9Y2H2 1132 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 PCDHB12Q9Y5F1 795 aa16.17■□□□□ 0.18
CDC42BPB-209ENST00000634889 PVALEFA0A1B0GWK0 134 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 FOSL2P15408 326 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 POU3F3P20264 500 aaPredicted RBP16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 MLH1P40692 756 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 GRM5P41594 1212 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 AFMP43652 599 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 LIG4P49917 911 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 RNASELQ05823 741 aaKnown RBP16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 STXBP4Q6ZWJ1 553 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 UNC13DQ70J99 1090 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 COLGALT1Q8NBJ5 622 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 GDPD5Q8WTR4 605 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 PAGE5Q96GU1 130 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 APOL6Q9BWW8 343 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
CDC42BPB-209ENST00000634889 CLDN3O15551 220 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 LPXNO60711 386 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 ZNF202O95125 648 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 GCNT3O95395 438 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 AKAP5P24588 427 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 PPM1AP35813 382 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 MCL1Q07820 350 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 EHHADHQ08426 723 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 KYAT1Q16773 422 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 ZC2HC1CQ53FD0 456 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 L1TD1Q5T7N2 865 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 KRBA2Q6ZNG9 492 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 TMEM87AQ8NBN3 555 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 ZNF558Q96NG5 402 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 GAD1Q99259 594 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 BLZF1Q9H2G9 400 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 SNTG2Q9NY99 539 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 HCSTQ9UBK5 93 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 PARP2Q9UGN5 583 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 EXOC7Q9UPT5 735 aa16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-209ENST00000634889 RFXAPO00287 272 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 GTPBP6O43824 516 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 RECQL4O94761 1208 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 ALDH7A1P49419 539 aaKnown RBP16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 AFF1P51825 1210 aaKnown RBP16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 FAM160A1Q05DH4 1040 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 GPM6BQ13491 265 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 CUL4BQ13620 913 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 PTPROQ16827 1216 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 KCNT2Q6UVM3 1135 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZFP42Q96MM3 310 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 ACCSQ96QU6 501 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 CCDC94Q9BW85 323 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 LMAN2LQ9H0V9 348 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 PLAGL2Q9UPG8 496 aa16.14■□□□□ 0.17
CDC42BPB-209ENST00000634889 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■□□□□ 9.2
CDC42BPB-209ENST00000634889 ZC3H11AO75152 810 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 POMCP01189 267 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 MYBP10242 640 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 CASP1P29466 404 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms