RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ITGB5P18084 799 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 LLGL1Q15334 1064 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 CCNYQ8ND76 341 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 TRMT13Q9NUP7 481 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 CRYBG1Q9Y4K1 1723 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FSD2A1L4K1 749 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 KIF2AO00139 706 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 OGTO15294 1046 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 EEF1GP26641 437 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ADKP55263 362 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 NCOA4Q13772 614 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 PKN1Q16512 942 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FBXL13Q8NEE6 735 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 NPLOC4Q8TAT6 608 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 RUSC1Q9BVN2 902 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 NDST4Q9H3R1 872 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 TIMM13Q9Y5L4 95 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ATRNL1Q5VV63 1379 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 LRRC37A3O60309 1634 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CYBBP04839 570 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ITGB3P05106 788 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 MMP3P08254 477 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 MYL4P12829 197 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 RARRES1P49788 294 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FPGSQ05932 587 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 PTPN21Q16825 1174 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ARL13BQ3SXY8 428 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SPECC1LQ69YQ0 1117 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CASC4Q6P4E1 433 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CYP26C1Q6V0L0 522 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF365Q70YC5 407 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 LRRC8DQ7L1W4 858 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 PALB2Q86YC2 1186 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 MAP7D3Q8IWC1 876 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 TMEM35BQ8NCS4 154 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 MRPS31Q92665 395 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SGIP1Q9BQI5 828 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 C17orf75Q9HAS0 396 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 DNAI1Q9UI46 699 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 DIS3Q9Y2L1 958 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SH3BP1Q9Y3L3 701 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 TRPM3Q9HCF6 1732 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 KIAA0391O15091 583 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CLTBP09497 229 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 IRF1P10914 325 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FERP16591 822 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ARL4AP40617 200 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 PRCPP42785 496 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CCDC85BQ15834 202 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF569Q5MCW4 686 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF280DQ6N043 979 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SHC4Q6S5L8 630 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 LRRC31Q6UY01 552 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 PEX26Q7Z412 305 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SAMSN1Q9NSI8 373 aaKnown RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 FBXO2Q9UK22 296 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-229ENST00000622668 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 SLC45A1Q9Y2W3 748 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 CNTNAP1P78357 1384 aa9.75□□□□□ -0.85
HDAC9-229ENST00000622668 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 TREHO43280 583 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 ERLIN1O75477 346 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 ODC1P11926 461 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 EPHB1P54762 984 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 NTRK3Q16288 839 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 CCDC14Q49A88 953 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 Q4G0T1 1027 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 NIPA1Q7RTP0 329 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 CCDC25Q86WR0 208 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 GUF1Q8N442 669 aaKnown RBP9.74□□□□□ -0.85
HDAC9-229ENST00000622668 CALN1Q9BXU9 219 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PHF20L1A8MW92 1017 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 H7C4K7 107 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PIK3R2O00459 728 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 FOXN1O15353 648 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PLA2G6O60733 806 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 AP3M2P53677 418 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 KCNH2Q12809 1159 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 SGO2Q562F6 1265 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PPP2R2DQ66LE6 453 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 MPZL3Q6UWV2 235 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-229ENST00000622668 TOGARAM2Q6ZUX3 1019 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 FAM133AQ8N9E0 248 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 DBF4BQ8NFT6 615 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 PPTC7Q8NI37 304 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 HPDLQ96IR7 371 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 RAB20Q9NX57 234 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 TBX20Q9UMR3 447 aa9.74□□□□□ -0.85
HDAC9-229ENST00000622668 SPATA31C2B4DYI2 1134 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms