RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	EFHB	Q8N7U6	833 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TMEM87A	Q8NBN3	555 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ERMN	Q8TAM6	284 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	NOC3L	Q8WTT2	800 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	STAM	Q92783	540 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	P2RX5	Q93086	422 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	IGSF21	Q96ID5	467 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CDK5RAP3	Q96JB5	506 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	MSLNL	Q96KJ4	702 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	RPS6KC1	Q96S38	1066 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	JPH2	Q9BR39	696 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	LRFN3	Q9BTN0	628 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TARS2	Q9BW92	718 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	PLVAP	Q9BX97	442 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	BACH2	Q9BYV9	841 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	LMAN2L	Q9H0V9	348 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CSRNP2	Q9H175	543 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	POMK	Q9H5K3	350 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ELAC1	Q9H777	363 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TUFT1	Q9NNX1	390 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ANKEF1	Q9NU02	776 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	LMCD1	Q9NZU5	365 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TBC1D7	Q9P0N9	293 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	DAXX	Q9UER7	740 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CACNA1H	O95180	2353 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TICRR	Q7Z2Z1	1910 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	USP34	Q70CQ2	3546 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	C2CD4D	B7Z1M9	353 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171		K7ENM7	598 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	PTGES	O14684	152 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	MEFV	O15553	781 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ADAM12	O43184	909 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	HOXA2	O43364	376 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	LYPLA2	O95372	231 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	KRT18	P05783	430 aa	Known RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	UROD	P06132	367 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CNP	P09543	421 aa	Known RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CYP11B2	P19099	503 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	PLCG1	P19174	1290 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	NCL	P19338	710 aa	Known RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	KLRC2	P26717	231 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RPA1	P27694	616 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CASP1	P29466	404 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	TNFSF9	P41273	254 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	BRCC3	P46736	316 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	NPTX2	P47972	431 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	FXR2	P51116	673 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RAB27A	P51159	221 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ARPP19	P56211	112 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	NTHL1	P78549	312 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ATP2C1	P98194	919 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	SOX4	Q06945	474 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	REST	Q13127	1097 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	PKP1	Q13835	747 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	MXD4	Q14582	209 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	SF3A1	Q15459	793 aa	Known RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CTC1	Q2NKJ3	1217 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RTP2	Q5QGT7	225 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ATF7IP2	Q5U623	682 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	KRT79	Q5XKE5	535 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	HAUS3	Q68CZ6	603 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RINT1	Q6NUQ1	792 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ANKRD54	Q6NXT1	300 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	SLC27A1	Q6PCB7	646 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	DTHD1	Q6ZMT9	781 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	DYM	Q7RTS9	669 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CABP7	Q86V35	215 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RNF135	Q8IUD6	432 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	COLGALT2	Q8IYK4	626 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	PDILT	Q8N807	584 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	IGSF22	Q8N9C0	903 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	SMRP1	Q8NCR6	262 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	C3orf58	Q8NDZ4	430 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZSWIM2	Q8NEG5	633 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	MCPH1	Q8NEM0	835 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	SLC22A17	Q8WUG5	538 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	RIN2	Q8WYP3	895 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	C18orf25	Q96B23	403 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM212A	Q96EL1	285 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	BICD1	Q96G01	975 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	EPSTI1	Q96J88	318 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	NACC1	Q96RE7	527 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	MRPL9	Q9BYD2	267 aa	Known RBP	4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	FGFBP2	Q9BYJ0	223 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	GPR62	Q9BZJ7	368 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	HAPLN2	Q9GZV7	340 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CCDC113	Q9H0I3	377 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CDT1	Q9H211	546 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	MAN1C1	Q9NR34	630 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM86C1	Q9NVL1	165 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	TUBGCP4	Q9UGJ1	667 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAN1	Q9Y2M0	1017 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	CNTNAP2	Q9UHC6	1331 aa		4.92	□□□□□ -1.62
LINC00649-219	ENST00000622171	DENND4C	Q5VZ89	1909 aa		4.91	□□□□□ -1.62
LINC00649-219	ENST00000622171	SDK1	Q7Z5N4	2213 aa		4.91	□□□□□ -1.62
LINC00649-219	ENST00000622171	CACNA1I	Q9P0X4	2223 aa		4.91	□□□□□ -1.62
LINC00649-219	ENST00000622171		A0A087X0B3	334 aa		4.91	□□□□□ -1.62
LINC00649-219	ENST00000622171	PPEF2	O14830	753 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms