RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 TAGAPQ8N103 731 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 SUGT1Q9Y2Z0 365 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 SPAG6O75602 509 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 KLHL2O95198 593 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 ASNSP08243 561 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 C1orf228Q6PIY5 440 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 RRM2BQ7LG56 351 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 RIBC1Q8N443 379 aaPredicted RBP9.84□□□□□ -0.83
ITSN2-213ENST00000622089 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
ITSN2-213ENST00000622089 FAM213AQ9BRX8 229 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 OLFML3Q9NRN5 406 aa9.84□□□□□ -0.83
ITSN2-213ENST00000622089 FARP1Q9Y4F1 1045 aaPredicted RBP9.84□□□□□ -0.83
ITSN2-213ENST00000622089 FDX1P10109 184 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 HSPA13P48723 471 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 FBXW4P57775 412 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 RASGRF1Q13972 1273 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 CNGA3Q16281 694 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 RCSD1Q6JBY9 416 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SGSM3Q96HU1 749 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 TRABDQ9H4I3 376 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 HOXC10Q9NYD6 342 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 INPP5FQ9Y2H2 1132 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 NLRP1Q9C000 1473 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 EFCAB6Q5THR3 1501 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SUPT3HO75486 399 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SRP72O76094 671 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 MYL3P08590 195 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 KCNA2P16389 499 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ITIH2P19823 946 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 CCND1P24385 295 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 THNSL1Q8IYQ7 743 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ZNF560Q96MR9 790 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 CASS4Q9NQ75 786 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SEC31BQ9NQW1 1179 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ZNF521Q96K83 1311 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 OCM2P0CE71 109 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 OCMP0CE72 109 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 RANBP1P43487 201 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 MRPS15P82914 257 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 UGP2Q16851 508 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 FASTKD1Q53R41 847 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SETD3Q86TU7 594 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 PASD1Q8IV76 773 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 FAM167BQ9BTA0 163 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 TUFT1Q9NNX1 390 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DDX28Q9NUL7 540 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 LIMA1Q9UHB6 759 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 NEDD4P46934 1319 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 H7C1W4 665 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 NCK2O43639 380 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 USP11P51784 963 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DEFA1P59665 94 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DEFA3P59666 94 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 C4orf22Q6V702 233 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 FASTKD5Q7L8L6 764 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 CATSPER3Q86XQ3 398 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ZNF473Q8WTR7 871 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ROPN1BQ9BZX4 212 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DDX47Q9H0S4 455 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ROPN1Q9HAT0 212 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 UVRAGQ9P2Y5 699 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 MTO1Q9Y2Z2 717 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 USP6P35125 1406 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 SPATA31E1Q6ZUB1 1445 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DENND3A2RUS2 1198 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 PPP1R37O75864 691 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 WDR47O94967 919 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 APOA4P06727 396 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 HNRNPCP07910 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ARSEP51690 589 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 PSMC5P62195 406 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 ACTN3Q08043 901 aaPredicted RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 GSPT2Q8IYD1 628 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 NSUN6Q8TEA1 469 aaKnown RBP9.83□□□□□ -0.84
ITSN2-213ENST00000622089 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 RUBCNLQ9H714 662 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 BARHL2Q9NY43 387 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
ITSN2-213ENST00000622089 DNAJC6O75061 913 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 QARSP47897 775 aaKnown RBP9.82□□□□□ -0.84
ITSN2-213ENST00000622089 RAD51Q06609 339 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 Q3C1V9 767 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 EFL1Q7Z2Z2 1120 aaKnown RBP9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PIGOQ8TEQ8 1089 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 CEP95Q96GE4 821 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PRMT1Q99873 361 aaKnown RBP9.82□□□□□ -0.84
ITSN2-213ENST00000622089 MRPL1Q9BYD6 325 aaKnown RBP9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PSMC3IPQ9P2W1 217 aaPredicted RBP9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PCDHB8Q9UN66 801 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 SAMD9Q5K651 1589 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PDXKO00764 312 aa9.82□□□□□ -0.84
ITSN2-213ENST00000622089 PJA2O43164 708 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms