RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FIZ1Q96SL8 496 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 ACO2Q99798 780 aaKnown RBP18.39■□□□□ 0.53
CBWD3-211ENST00000615061 CXCL16Q9H2A7 254 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 PARVGQ9HBI0 331 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 PARP2Q9UGN5 583 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 TBCAO75347 108 aaKnown RBP18.38■□□□□ 0.53
CBWD3-211ENST00000615061 CEP120Q8N960 986 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 SLC17A8Q8NDX2 589 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 URGCPQ8TCY9 931 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 ZBTB45Q96K62 511 aaPredicted RBP18.38■□□□□ 0.53
CBWD3-211ENST00000615061 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 MRPL4Q9BYD3 311 aaKnown RBP18.38■□□□□ 0.53
CBWD3-211ENST00000615061 TNFSF13BQ9Y275 285 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 CITO14578 2027 aa18.38■□□□□ 0.53
CBWD3-211ENST00000615061 KRT85P78386 507 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
CBWD3-211ENST00000615061 SLC39A11Q8N1S5 342 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 DHX58Q96C10 678 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 LMAN2LQ9H0V9 348 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 PTPRHQ9HD43 1115 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 UBN1Q9NPG3 1134 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 K7ENM7 598 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 TRAK2O60296 914 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 RECQL4O94761 1208 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 GALTP07902 379 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 NMT1P30419 496 aaKnown RBP18.37■□□□□ 0.53
CBWD3-211ENST00000615061 SLC11A1P49279 550 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 ALDH7A1P49419 539 aaKnown RBP18.37■□□□□ 0.53
CBWD3-211ENST00000615061 ERVFC1P60507 584 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 BCL7CQ8WUZ0 217 aaPredicted RBP18.37■□□□□ 0.53
CBWD3-211ENST00000615061 CDT1Q9H211 546 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 GDAQ9Y2T3 454 aa18.37■□□□□ 0.53
CBWD3-211ENST00000615061 ABLIM1O14639 778 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 INPPL1O15357 1258 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 STRN3Q13033 797 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 ZNF568Q3ZCX4 644 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 TIGD5Q53EQ6 642 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 RESP18Q5W5W9 173 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 FAM178BQ8IXR5 827 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 HACE1Q8IYU2 909 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 RSPH1Q8WYR4 309 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 NSUN3Q9H649 340 aaKnown RBP18.36■□□□□ 0.53
CBWD3-211ENST00000615061 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 SPG21Q9NZD8 308 aa18.36■□□□□ 0.53
CBWD3-211ENST00000615061 POLR2DO15514 142 aaKnown RBP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 HARSP12081 509 aaKnown RBP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 PROZP22891 400 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 OSTNP61366 133 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 PLCB3Q01970 1234 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TFF2Q03403 129 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 DCAF4L1Q3SXM0 396 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 ZC2HC1CQ53FD0 456 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 ADGRD2Q7Z7M1 963 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 MRPS27Q92552 414 aaKnown RBP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TCHPQ9BT92 498 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TBC1D7Q9P0N9 293 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 KANSL3Q9P2N6 904 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 ANKFY1Q9P2R3 1169 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 CACNG4Q9UBN1 327 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 PPM1AP35813 382 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 COLGALT2Q8IYK4 626 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 FAM193BQ96PV7 902 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-211ENST00000615061 HAPLN2Q9GZV7 340 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TLR9Q9NR96 1032 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TBX20Q9UMR3 447 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
CBWD3-211ENST00000615061 TCF20Q9UGU0 1960 aaKnown RBP18.34■□□□□ 0.53
CBWD3-211ENST00000615061 F8W810 466 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 PTGESO14684 152 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 IDEP14735 1019 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 UBE3AQ05086 875 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 IQUBQ8NA54 791 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 MICAL1Q8TDZ2 1067 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 RABGGTAQ92696 567 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 TMEM169Q96HH4 297 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 IKZF4Q9H2S9 585 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
CBWD3-211ENST00000615061 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-211ENST00000615061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.53
CBWD3-211ENST00000615061 NRP1O14786 923 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 TOM1L1O75674 476 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 CASP1P29466 404 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 DSC1Q08554 894 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 SEZ6Q53EL9 994 aa18.33■□□□□ 0.53
CBWD3-211ENST00000615061 PLPP4Q5VZY2 271 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms