RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	ZNF668	Q96K58	619 aa	Predicted RBP	8	□□□□□ -1.13
PVT1-222	ENST00000613916	ZBTB45	Q96K62	511 aa	Predicted RBP	8	□□□□□ -1.13
PVT1-222	ENST00000613916	RNPC3	Q96LT9	517 aa	Known RBP	8	□□□□□ -1.13
PVT1-222	ENST00000613916	TARS2	Q9BW92	718 aa	Known RBP	8	□□□□□ -1.13
PVT1-222	ENST00000613916	MINDY3	Q9H8M7	445 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	IFT122	Q9HBG6	1241 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	SETD4	Q9NVD3	440 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	ATP11B	Q9Y2G3	1177 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	8	□□□□□ -1.13
PVT1-222	ENST00000613916	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	8	□□□□□ -1.13	1e-8	■□□□□ 8.4
PVT1-222	ENST00000613916	PHLPP2	Q6ZVD8	1323 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	SCN1A	P35498	2009 aa		8	□□□□□ -1.13
PVT1-222	ENST00000613916	GOLGA8IP	A6NC78	632 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM43B	A6NCK2	446 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	GOLGA8J	A6NMD2	632 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	AKR1B15	C9JRZ8	316 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	ABLIM1	O14639	778 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	HNRNPDL	O14979	420 aa	Known RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TRANK1	O15050	2925 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	EXOC3	O60645	756 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	AFP	P02771	609 aa	Known RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TPM2	P07951	284 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	MYL3	P08590	195 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	IQCF3	P0C7M6	154 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	SRGAP2C	P0DJJ0	459 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	SKIL	P12757	684 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	SFPQ	P23246	707 aa	Known RBP eCLIP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	EFNA5	P52803	228 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	EPHB4	P54760	987 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	DLG4	P78352	724 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	MRPS5	P82675	430 aa	Known RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	BFSP1	Q12934	665 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM14	Q14142	442 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM60	Q495X7	471 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	FKBP15	Q5T1M5	1219 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	CCSAP	Q6IQ19	270 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	CRELD2	Q6UXH1	353 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	PPFIBP1	Q86W92	1011 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	CBWD2	Q8IUF1	395 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	RDH13	Q8NBN7	331 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	RETREG2	Q8NC44	543 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	KLHDC9	Q8NEP7	349 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	CPLX3	Q8WVH0	158 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	POMGNT1	Q8WZA1	660 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	SAAL1	Q96ER3	474 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	MFSD14A	Q96MC6	490 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	PANX2	Q96RD6	677 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	ACO2	Q99798	780 aa	Known RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	NFKBIZ	Q9BYH8	718 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	GAN	Q9H2C0	597 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	FZD8	Q9H461	694 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	ZNF576	Q9H609	170 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	AGPAT5	Q9NUQ2	364 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	CAPN11	Q9UMQ6	739 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	FRMD4B	Q9Y2L6	1034 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	TDRD15	B5MCY1	1934 aa	Known RBP	7.99	□□□□□ -1.13
PVT1-222	ENST00000613916	NRCAM	Q92823	1304 aa		7.99	□□□□□ -1.13
PVT1-222	ENST00000613916		A0A087WZ62	844 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916		A0A0B4J269	797 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916		A0A1W2PQJ5	194 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	GTPBP10	A4D1E9	387 aa	Known RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	ZNF500	O60304	480 aa	Predicted RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	FAM189A1	O60320	539 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	KPNA6	O60684	536 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	PGK1	P00558	417 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	VTN	P04004	478 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	PRKCB	P05771	671 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	C6orf222	P0C671	652 aa	Predicted RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM49	P0CI25	452 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	TRIM49C	P0CI26	452 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	SLC9A1	P19634	815 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	PROZ	P22891	400 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	ITGB8	P26012	769 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	KRT9	P35527	623 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	FMO5	P49326	533 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	LIG4	P49917	911 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	GPC3	P51654	580 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	WNT7B	P56706	349 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	ZNF200	P98182	395 aa	Predicted RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	APBA1	Q02410	837 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	MBTD1	Q05BQ5	628 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	CYP24A1	Q07973	514 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	PPP3CA	Q08209	521 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	STRN3	Q13033	797 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	TFDP1	Q14186	410 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	SNRNP35	Q16560	246 aa	Known RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	AMHR2	Q16671	573 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	FAM187B	Q17R55	369 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	CBWD6	Q4V339	395 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	CBWD3	Q5JTY5	395 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	GNAS	Q5JWF2	1037 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	CBWD5	Q5RIA9	395 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	NFRKB	Q6P4R8	1299 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	WDR59	Q6PJI9	974 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	ZPBP2	Q6X784	338 aa		7.98	□□□□□ -1.13
PVT1-222	ENST00000613916	RUFY4	Q6ZNE9	571 aa		7.98	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms