RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SV2AQ7L0J3 742 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 MAP4K3Q8IVH8 894 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 HELQQ8TDG4 1101 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 BICD1Q96G01 975 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 RRP15Q9Y3B9 282 aaKnown RBP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 KRT5P13647 590 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 CCND2P30279 289 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 ACOT2P49753 483 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 CFHP08603 1231 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 MAPTP10636 758 aaKnown RBP15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 HSPA9P38646 679 aaKnown RBP15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 ATP8B4Q8TF62 1192 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF516Q92618 1163 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 PICK1Q9NRD5 415 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 SNX24Q9Y343 169 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 RLFQ13129 1914 aa15.17■□□□□ 0.02
PCDHGA3-202ENST00000612467 SHOX2O60902 331 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 PYGMP11217 842 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CYP11B1P15538 503 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 BAG6P46379 1132 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 KCNJ1P48048 391 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SMTNP53814 917 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 ACTR2P61160 394 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 KRT39Q6A163 491 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SRLQ86TD4 932 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 C12orf56Q8IXR9 622 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 UHMK1Q8TAS1 419 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 WHAMMQ8TF30 809 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CALR3Q96L12 384 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 NUP85Q9BW27 656 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 POLR3FQ9H1D9 316 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 PARP14Q460N5 1801 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 MYO1CO00159 1063 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CLSTN1O94985 981 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 EDN1P05305 212 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CCDC172P0C7W6 258 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 HARSP12081 509 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CTNNA1P35221 906 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 GPC5P78333 572 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 MYBPC2Q14324 1141 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 TTC27Q6P3X3 843 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 BCAS4Q8TDM0 211 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF653Q96CK0 615 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 HAPLN2Q9GZV7 340 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 JPH1Q9HDC5 661 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 RPS6KA5O75582 802 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 ATP4AP20648 1035 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SFNP31947 248 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 DSG3P32926 999 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 TEX2Q8IWB9 1127 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 SHC3Q92529 594 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 ANKEF1Q9NU02 776 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
PCDHGA3-202ENST00000612467 H0YGN5 161 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 CCDC188H7C350 402 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 SEC24CP53992 1094 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 NLRP11P59045 1033 aaKnown RBP15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 DR1Q01658 176 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 CYP24A1Q07973 514 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF844Q08AG5 666 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 ALCAMQ13740 583 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 MREGQ8N565 214 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF668Q96K58 619 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 GGA3Q9NZ52 723 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 NFS1Q9Y697 457 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 TTLL13PA6NNM8 815 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 MYO1FO00160 1098 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 RTN2O75298 545 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 PASD1Q8IV76 773 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 PRELID2Q8N945 189 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 FBXL13Q8NEE6 735 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF564Q8TBZ8 553 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 NSUN6Q8TEA1 469 aaKnown RBP15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 CPA5Q8WXQ8 436 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 CYP26B1Q9NR63 512 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 CWC15Q9P013 229 aaKnown RBP15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 SLC9A2Q9UBY0 812 aa15.15■□□□□ 0.02
PCDHGA3-202ENST00000612467 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 O00370 1275 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 EIF3HO15372 352 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 PPFIA4O75335 1185 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 PLTPP55058 493 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms