RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 PITPNM3Q9BZ71 974 aa15.24■□□□□ 0.03
LINC02538-201ENST00000609107 GOLPH3Q9H4A6 298 aa15.24■□□□□ 0.03
LINC02538-201ENST00000609107 DDX56Q9NY93 547 aaKnown RBP15.24■□□□□ 0.03
LINC02538-201ENST00000609107 GPC3P51654 580 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 TRMT10CQ7L0Y3 403 aaKnown RBP15.23■□□□□ 0.03
LINC02538-201ENST00000609107 NOD1Q9Y239 953 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 IQANK1A0A1B0GTG1 560 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 PABPN1LA6NDY0 278 aaKnown RBP15.23■□□□□ 0.03
LINC02538-201ENST00000609107 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
LINC02538-201ENST00000609107 KRT7P08729 469 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 BRAFP15056 766 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 EFNA5P52803 228 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 MYBPC2Q14324 1141 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 CCT8L2Q96SF2 557 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 TUBB6Q9BUF5 446 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 PACSIN1Q9BY11 444 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 TMX2Q9Y320 296 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 ICAM1P05362 532 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 COMTP21964 271 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 COG2Q14746 738 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF568Q3ZCX4 644 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 PHLDB3Q6NSJ2 640 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 NME8Q8N427 588 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 AGBL1Q96MI9 1066 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 TEX13BQ9BXU2 312 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF446Q9NWS9 450 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 SIK3Q9Y2K2 1263 aa15.23■□□□□ 0.03
LINC02538-201ENST00000609107 LSP1P33241 339 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 DRP2Q13474 957 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 TKFCQ3LXA3 575 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 SRRM1Q8IYB3 904 aaKnown RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF473Q8WTR7 871 aaKnown RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 PRMT6Q96LA8 375 aaPredicted RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 MOV10L1Q9BXT6 1211 aaKnown RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 VCXQ9H320 206 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZBTB22O15209 634 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ITIH2P19823 946 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ARL1P40616 181 aaPredicted RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 IZUMO3Q5VZ72 239 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 DDX42Q86XP3 938 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 TMEM139Q8IV31 216 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 GINM1Q9NU53 330 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 WNT7AO00755 349 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 MAPK13O15264 365 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 SASH3O75995 380 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ARL4AP40617 200 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 DUOXA2Q1HG44 320 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 CYFIP1Q7L576 1253 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 DPP9Q86TI2 863 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 SESTD1Q86VW0 696 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 CAVIN3Q969G5 261 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 C17orf75Q9HAS0 396 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZBED1O96006 694 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 GUCY2CP25092 1073 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 SLC12A2P55011 1212 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 ZNF720Q7Z2F6 126 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 FAM149B1Q96BN6 582 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
LINC02538-201ENST00000609107 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
LINC02538-201ENST00000609107 PHKA2P46019 1235 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 GRIK5Q16478 980 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 COBLL1Q53SF7 1204 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 EAPPQ56P03 285 aaPredicted RBP15.21■□□□□ 0.03
LINC02538-201ENST00000609107 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 CERKQ8TCT0 537 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 SEPT10Q9P0V9 454 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 ECE1P42892 770 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 MUM1Q2TAK8 710 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 PLA2G4FQ68DD2 849 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 TRAIPQ9BWF2 469 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 MAP3K20Q9NYL2 800 aaKnown RBP15.21■□□□□ 0.03
LINC02538-201ENST00000609107 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 SETD1AO15047 1707 aaKnown RBP15.21■□□□□ 0.03
LINC02538-201ENST00000609107 FGFR4P22455 802 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 HMGCS2P54868 508 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 PSMC6P62333 389 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 PDE1BQ01064 536 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 STAT4Q14765 748 aa15.21■□□□□ 0.03
LINC02538-201ENST00000609107 KLHL38Q2WGJ6 581 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms