RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PPP1R9AQ9ULJ8 1098 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 ZNF148Q9UQR1 794 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 SERPINB7O75635 380 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 DCTN3O75935 186 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 FCER1AP12319 257 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 CCNE1P24864 410 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 STK4Q13043 487 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 RAPGEF1Q13905 1077 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 CLPPQ16740 277 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 MAGEB18Q96M61 343 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PHTF1Q9UMS5 762 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 SMIM31A0A1B0GVY4 71 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 GYG2O15488 501 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 KLRC4O43908 158 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 OXSR1O95747 527 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-218ENST00000608440 PCSK6P29122 969 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 POU5F1Q01860 360 aaKnown RBP13.4□□□□□ -0.26
CTCFL-218ENST00000608440 DMPKQ09013 629 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 SLC18A3Q16572 532 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.26
CTCFL-218ENST00000608440 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 SLC7A5P1Q8MH63 180 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 NKIRAS1Q9NYS0 192 aa13.4□□□□□ -0.26
CTCFL-218ENST00000608440 HEMK1Q9Y5R4 338 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-218ENST00000608440 CES2O00748 559 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 FBP2O00757 339 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 KRT13P13646 458 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 KRT2P35908 639 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 PDE4DQ08499 809 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 CDC16Q13042 620 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 UBE4AQ14139 1066 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 ERLEC1Q96DZ1 483 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 TMEM87BQ96K49 555 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 OSBPL10Q9BXB5 764 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 EURLQ9NYK6 297 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 HESX1Q9UBX0 185 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 STK24Q9Y6E0 443 aa13.4□□□□□ -0.27
CTCFL-218ENST00000608440 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.27
CTCFL-218ENST00000608440 PFASO15067 1338 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 EP400Q96L91 3159 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 BICDL2A1A5D9 508 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 GSC2O15499 205 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ALDH2P05091 517 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 SERPING1P05155 500 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CASP7P55210 303 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 BTKQ06187 659 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 PHLDB2Q86SQ0 1253 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CCDC84Q86UT8 332 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 USP33Q8TEY7 942 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CASP10Q92851 521 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 HNRNPABQ99729 332 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CEP72Q9P209 647 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ARMCX3Q9UH62 379 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 TMA7Q9Y2S6 64 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 KANSL1LA0AUZ9 987 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 TXNDC9O14530 226 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 RELAQ04206 551 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 ACAP1Q15027 740 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 TMEM266Q2M3C6 531 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 PATL1Q86TB9 770 aaKnown RBP13.39□□□□□ -0.27
CTCFL-218ENST00000608440 SDR16C5Q8N3Y7 309 aa13.39□□□□□ -0.27
CTCFL-218ENST00000608440 TMCO5AQ8N6Q1 288 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms