RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 LSM14BQ9BX40 385 aaKnown RBP23.82■■□□□ 1.4
USF2-216ENST00000607959 SIX2Q9NPC8 291 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 PRMT7Q9NVM4 692 aaPredicted RBP23.82■■□□□ 1.4
USF2-216ENST00000607959 PTPN22Q9Y2R2 807 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 LRRIQ3A6PVS8 624 aaPredicted RBP23.82■■□□□ 1.4
USF2-216ENST00000607959 ACTN1P12814 892 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 KRT13P13646 458 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 TRIM21P19474 475 aaKnown RBP23.82■■□□□ 1.4
USF2-216ENST00000607959 PON1P27169 355 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 ATF7IP2Q5U623 682 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 FAM84AQ96KN4 292 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 PANX2Q96RD6 677 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 NUP58Q9BVL2 599 aa23.82■■□□□ 1.4
USF2-216ENST00000607959 TOPORSQ9NS56 1045 aaPredicted RBP23.82■■□□□ 1.4
USF2-216ENST00000607959 CNTNAP2Q9UHC6 1331 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 A0A1W2PQJ5 194 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 GTPBP10A4D1E9 387 aaKnown RBP23.81■■□□□ 1.4
USF2-216ENST00000607959 KIAA0391O15091 583 aaKnown RBP23.81■■□□□ 1.4
USF2-216ENST00000607959 CLDN3O15551 220 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 FGFR4P22455 802 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 FECHP22830 423 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 KRT9P35527 623 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 TMC2Q8TDI7 906 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 CCDC127Q96BQ5 260 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 GANQ9H2C0 597 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 ABHD10Q9NUJ1 306 aa23.81■■□□□ 1.4
USF2-216ENST00000607959 TSPAN1O60635 241 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 TNFSF9P41273 254 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 SRGAP1Q7Z6B7 1085 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 SESTD1Q86VW0 696 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 CNGA4Q8IV77 575 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 C17orf53Q8N3J3 647 aaPredicted RBP23.8■■□□□ 1.4
USF2-216ENST00000607959 PCSK9Q8NBP7 692 aaKnown RBP23.8■■□□□ 1.4
USF2-216ENST00000607959 KIAA1524Q8TCG1 905 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 TMEM40Q8WWA1 233 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 BAP1Q92560 729 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 DNAJC7Q99615 494 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 TNFSF13BQ9Y275 285 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 ZNF233A6NK53 670 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 LRRN2O75325 713 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 GNAT1P11488 350 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 HARSP12081 509 aaKnown RBP23.8■■□□□ 1.4
USF2-216ENST00000607959 ARF4P18085 180 aaPredicted RBP23.8■■□□□ 1.4
USF2-216ENST00000607959 GCLMP48507 274 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 ACLYP53396 1101 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 EXOC3L4Q17RC7 722 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 MPZL3Q6UWV2 235 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 RNF180Q86T96 592 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 LMO3Q8TAP4 145 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 CPB2Q96IY4 423 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 OSMRQ99650 979 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 KIAA1586Q9HCI6 787 aa23.8■■□□□ 1.4
USF2-216ENST00000607959 LUC7L2Q9Y383 392 aaKnown RBP23.8■■□□□ 1.4
USF2-216ENST00000607959 E4F1Q66K89 784 aaPredicted RBP23.79■■□□□ 1.4
USF2-216ENST00000607959 GBP6Q6ZN66 633 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 PRIMPOLQ96LW4 560 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 SCLT1Q96NL6 688 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 TMEM117Q9H0C3 514 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 UNC93B1Q9H1C4 597 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 CDT1Q9H211 546 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 PDZD7Q9H5P4 517 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 GINS2Q9Y248 185 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 PTPRJQ12913 1337 aa23.79■■□□□ 1.4
USF2-216ENST00000607959 MATR3P43243 847 aaKnown RBP eCLIP23.78■■□□□ 1.4
USF2-216ENST00000607959 CLDN10P78369 228 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 NOLC1Q14978 699 aaKnown RBP eCLIP23.78■■□□□ 1.4
USF2-216ENST00000607959 PSMD6Q15008 389 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 WDR59Q6PJI9 974 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 CEP120Q8N960 986 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 NEK11Q8NG66 645 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 ZNF516Q92618 1163 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 TCHPQ9BT92 498 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.78■■□□□ 1.4
USF2-216ENST00000607959 PLCB1Q9NQ66 1216 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 GCNT4Q9P109 453 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 AJAP1Q9UKB5 411 aaPredicted RBP23.78■■□□□ 1.4
USF2-216ENST00000607959 OGTO15294 1046 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 LDHAP00338 332 aaKnown RBP23.78■■□□□ 1.4
USF2-216ENST00000607959 DARSP14868 501 aaKnown RBP23.78■■□□□ 1.4
USF2-216ENST00000607959 ZBED6P86452 979 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 MYL7Q01449 175 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 ENPEPQ07075 957 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 FAM47CQ5HY64 1035 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 KLHDC7AQ5VTJ3 777 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 CCDC51Q96ER9 411 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 BAG1Q99933 345 aaPredicted RBP23.78■■□□□ 1.4
USF2-216ENST00000607959 PDE11AQ9HCR9 933 aa23.78■■□□□ 1.4
USF2-216ENST00000607959 HOXA11P31270 313 aaPredicted RBP23.77■■□□□ 1.4
USF2-216ENST00000607959 CDC42EP1Q00587 391 aa23.77■■□□□ 1.4
USF2-216ENST00000607959 EPC2Q52LR7 807 aa23.77■■□□□ 1.4
USF2-216ENST00000607959 TRIM65Q6PJ69 517 aa23.77■■□□□ 1.4
USF2-216ENST00000607959 SERINC5Q86VE9 423 aa23.77■■□□□ 1.4
USF2-216ENST00000607959 GCOM2Q9BZD3 368 aaPredicted RBP23.77■■□□□ 1.4
USF2-216ENST00000607959 CPSF3Q9UKF6 684 aaKnown RBP23.77■■□□□ 1.4
USF2-216ENST00000607959 PMM2O15305 246 aa23.76■■□□□ 1.39
USF2-216ENST00000607959 MEFVO15553 781 aaPredicted RBP23.76■■□□□ 1.39
USF2-216ENST00000607959 TPM1P09493 284 aa23.76■■□□□ 1.39
USF2-216ENST00000607959 MTFR1Q15390 333 aa23.76■■□□□ 1.39
USF2-216ENST00000607959 ZNF568Q3ZCX4 644 aa23.76■■□□□ 1.39
USF2-216ENST00000607959 TAF2Q6P1X5 1199 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms