RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 NELL1Q92832 810 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 BCO2Q9BYV7 579 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 LTB4R2Q9NPC1 389 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 FNIP2Q9P278 1114 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
SSBP4-211ENST00000601614 CACNG4Q9UBN1 327 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 CDH7Q9ULB5 785 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 PCDHGA2Q9Y5H1 932 aa17.92■□□□□ 0.46
SSBP4-211ENST00000601614 FAM170BA6NMN3 283 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 EML1O00423 815 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 C1RP00736 705 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 CPA1P15085 419 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 LAMTOR4Q0VGL1 99 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 NTRK3Q16288 839 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 ETNPPLQ8TBG4 499 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 FGF13Q92913 245 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 CPB2Q96IY4 423 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 EPC1Q9H2F5 836 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 DHX33Q9H6R0 707 aaKnown RBP17.91■□□□□ 0.46
SSBP4-211ENST00000601614 CDV3Q9UKY7 258 aaKnown RBP17.91■□□□□ 0.46
SSBP4-211ENST00000601614 ZFP37Q9Y6Q3 630 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-211ENST00000601614 NID2Q14112 1375 aa17.91■□□□□ 0.46
SSBP4-211ENST00000601614 RALGAPA1Q6GYQ0 2036 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 TARSP26639 723 aaKnown RBP17.9■□□□□ 0.46
SSBP4-211ENST00000601614 PSMC5P62195 406 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 PRKCQQ04759 706 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 RTP2Q5QGT7 225 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 ITFG1Q8TB96 612 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 BICD2Q8TD16 824 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 ATRIPQ8WXE1 791 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSBP4-211ENST00000601614 ZSCAN32Q9NX65 697 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 FBXW11Q9UKB1 542 aa17.9■□□□□ 0.46
SSBP4-211ENST00000601614 CFAP47Q6ZTR5 3102 aa17.89■□□□□ 0.46
SSBP4-211ENST00000601614 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 SHISA7A6NL88 538 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 TSPAN1O60635 241 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 SDHBP21912 280 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 CYP3A7P24462 503 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 LMNB2Q03252 620 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 FZD5Q13467 585 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 ST3GAL2Q16842 350 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 GPR65Q8IYL9 337 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 GPR161Q8N6U8 529 aaKnown RBP17.89■□□□□ 0.45
SSBP4-211ENST00000601614 RNF149Q8NC42 400 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 CNNM3Q8NE01 707 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 PSPC1Q8WXF1 523 aaKnown RBP17.89■□□□□ 0.45
SSBP4-211ENST00000601614 KXD1Q9BQD3 176 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 JPH2Q9BR39 696 aaPredicted RBP17.89■□□□□ 0.45
SSBP4-211ENST00000601614 PAAF1Q9BRP4 392 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 COLEC11Q9BWP8 271 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 APOL6Q9BWW8 343 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 NXF3Q9H4D5 531 aaKnown RBP17.89■□□□□ 0.45
SSBP4-211ENST00000601614 UBN1Q9NPG3 1134 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 ADAM28Q9UKQ2 775 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 USP18Q9UMW8 372 aa17.89■□□□□ 0.45
SSBP4-211ENST00000601614 F5P12259 2224 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CCDC196A0A1B0GTZ2 297 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 PRR5-ARHGAP8B1AHC4 643 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 ADRB1P08588 477 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 ARHGAP8P85298 464 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 POTEHQ6S545 545 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 FERMT3Q86UX7 667 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CCDC148Q8NFR7 591 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 SLC7A3Q8WY07 619 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CLDN23Q96B33 292 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 BORCS6Q96GS4 357 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CLSTN3Q9BQT9 956 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 RTKNQ9BST9 563 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 COL4A2P08572 1712 aa17.88■□□□□ 0.45
SSBP4-211ENST00000601614 CHD6Q8TD26 2715 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 CCL16O15467 120 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 ADAM12O43184 909 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 SLC37A4O43826 429 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 ERLIN2O94905 339 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 AKAP5P24588 427 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 Q6ZUG5 572 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 MTSS1LQ765P7 747 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 BRF1Q92994 677 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 SLC26A6Q9BXS9 759 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 RNF26Q9BY78 433 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-211ENST00000601614 PRMT8Q9NR22 394 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-211ENST00000601614 HCFC1R1Q9NWW0 138 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 VAV3Q9UKW4 847 aa17.87■□□□□ 0.45
SSBP4-211ENST00000601614 M0R2N6 131 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 ZBTB39O15060 712 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 C8AP07357 584 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 QARSP47897 775 aaKnown RBP17.86■□□□□ 0.45
SSBP4-211ENST00000601614 AMHR2Q16671 573 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 ZBTB41Q5SVQ8 909 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 RSPO2Q6UXX9 243 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-211ENST00000601614 TPRG1Q6ZUI0 275 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 CDR2LQ86X02 465 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-211ENST00000601614 NPAS3Q8IXF0 933 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 HASPINQ8TF76 798 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms