RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CDR2LQ86X02 465 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 CLP1Q92989 425 aaKnown RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 CASD1Q96PB1 797 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 ACCSQ96QU6 501 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 EXOC1Q9NV70 894 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 MTMR10Q9NXD2 777 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 TBC1D7Q9P0N9 293 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 MRPL42Q9Y6G3 142 aaKnown RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 MYH11P35749 1972 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 ACTN4O43707 911 aaKnown RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 KINO60870 393 aaKnown RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 OFD1O75665 1012 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 FOSL2P15408 326 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 IGFBP4P22692 258 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 GATMP50440 423 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 COASYQ13057 564 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 HSP90AA2PQ14568 343 aaPredicted RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 BMS1Q14692 1282 aaKnown RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 GRIN2CQ14957 1233 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 NOLC1Q14978 699 aaKnown RBP eCLIP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 POSTNQ15063 836 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 FAM26FQ5R3K3 315 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 KRBA2Q6ZNG9 492 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 ZBTB33Q86T24 672 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 MAP4K3Q8IVH8 894 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 THNSL1Q8IYQ7 743 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 SMG8Q8ND04 991 aaKnown RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 ZNF558Q96NG5 402 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 CDX2Q99626 313 aaPredicted RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 C17orf80Q9BSJ5 609 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 BLZF1Q9H2G9 400 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 PRDM12Q9H4Q4 367 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
SRRM1-223ENST00000600523 HES2Q9Y543 173 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 GBF1Q92538 1859 aa14.24□□□□□ -0.13
SRRM1-223ENST00000600523 PTPRSQ13332 1948 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 ARL5CA6NH57 179 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 KIF20AO95235 890 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 HARSP12081 509 aaKnown RBP14.23□□□□□ -0.13
SRRM1-223ENST00000600523 AKAP5P24588 427 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 MLH1P40692 756 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 GRM5P41594 1212 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 KRT17Q04695 432 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 PSMD2Q13200 908 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 GPM6BQ13491 265 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 ZC2HC1CQ53FD0 456 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-223ENST00000600523 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
SRRM1-223ENST00000600523 AGMOQ6ZNB7 445 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 TAS1R3Q7RTX0 852 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 P2RX5Q93086 422 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 ACAP3Q96P50 834 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 GAD1Q99259 594 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 MSTO1Q9BUK6 570 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 GBP3Q9H0R5 595 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 TBC1D13Q9NVG8 400 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 PUF60Q9UHX1 559 aaKnown RBP14.23□□□□□ -0.13
SRRM1-223ENST00000600523 GDAQ9Y2T3 454 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 TCHHQ07283 1943 aa14.23□□□□□ -0.13
SRRM1-223ENST00000600523 TTLL13PA6NNM8 815 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 C5orf67F2Z3F1 127 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRRM1-223ENST00000600523 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRRM1-223ENST00000600523 RECQL4O94761 1208 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 SMC2O95347 1197 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 POMCP01189 267 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 PIGRP01833 764 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 ALDH2P05091 517 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 UBE2HP62256 183 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 GRIK3Q13003 919 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 CUL4BQ13620 913 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 EEF1DP3Q658K8 133 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 PPP2R3CQ969Q6 453 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 LMAN2LQ9H0V9 348 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 CDT1Q9H211 546 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 PTPRHQ9HD43 1115 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 RNF19AQ9NV58 838 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 RMND1Q9NWS8 449 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 LMCD1Q9NZU5 365 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 STK39Q9UEW8 545 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
SRRM1-223ENST00000600523 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.22□□□□□ -0.13
SRRM1-223ENST00000600523 UBE4BO95155 1302 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 H3BNC9 293 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
SRRM1-223ENST00000600523 THP07101 528 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 CLTAP09496 248 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 PROZP22891 400 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 OSTNP61366 133 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 UBE3AQ05086 875 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 MCL1Q07820 350 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 KCNT2Q6UVM3 1135 aa14.21□□□□□ -0.13
SRRM1-223ENST00000600523 HS2ST1Q7LGA3 356 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms