RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	DHTKD1	Q96HY7	919 aa	Predicted RBP	24.03	■■□□□ 1.44
LTBP4-227	ENST00000600026	TSPY26P	Q9H489	355 aa		24.03	■■□□□ 1.44
LTBP4-227	ENST00000600026	TNFSF13B	Q9Y275	285 aa		24.03	■■□□□ 1.44
LTBP4-227	ENST00000600026	GJB5	O95377	273 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	PIGR	P01833	764 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	ATF7	P17544	494 aa	Predicted RBP	24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	ANO6	Q4KMQ2	910 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	KLHL10	Q6JEL2	608 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	ZPBP2	Q6X784	338 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	ZNF598	Q86UK7	904 aa	Known RBP	24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	NELFCD	Q8IXH7	590 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	SYCP3	Q8IZU3	236 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	CRIPAK	Q8N1N5	446 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	DNAJC25	Q9H1X3	360 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	ELAC1	Q9H777	363 aa	Known RBP	24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	TMEM161A	Q9NX61	479 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	LRFN2	Q9ULH4	789 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	PCDHB2	Q9Y5E7	798 aa		24.02	■■□□□ 1.44
LTBP4-227	ENST00000600026	COL6A3	P12111	3177 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	CAVIN2	O95810	425 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	STAG3L1	P0CL83	205 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	SKI	P12755	728 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	CD44	P16070	742 aa	Known RBP	24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	KCNA1	Q09470	495 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	KNOP1	Q1ED39	458 aa	Known RBP	24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	LRIT3	Q3SXY7	679 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	RNF169	Q8NCN4	708 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	ADPGK	Q9BRR6	497 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	TRIM6	Q9C030	488 aa	Predicted RBP	24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	PTPRH	Q9HD43	1115 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	PCDHB7	Q9Y5E2	793 aa		24.01	■■□□□ 1.43
LTBP4-227	ENST00000600026	ABLIM1	O14639	778 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	HNRNPDL	O14979	420 aa	Known RBP	24	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZNF623	O75123	536 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	PROZ	P22891	400 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	ERCC5	P28715	1186 aa	Predicted RBP	24	■■□□□ 1.43
LTBP4-227	ENST00000600026	LIG4	P49917	911 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	RABGGTB	P53611	331 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	PAK1	Q13153	545 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	DCAF4L1	Q3SXM0	396 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZNF568	Q3ZCX4	644 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	SMG8	Q8ND04	991 aa	Known RBP	24	■■□□□ 1.43
LTBP4-227	ENST00000600026	NELFB	Q8WX92	580 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	TSG101	Q99816	390 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZBED2	Q9BTP6	218 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	IKZF4	Q9H2S9	585 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	RNF216	Q9NWF9	866 aa	Predicted RBP	24	■■□□□ 1.43
LTBP4-227	ENST00000600026	ANKFY1	Q9P2R3	1169 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	CTNND2	Q9UQB3	1225 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	IPP	Q9Y573	584 aa		24	■■□□□ 1.43
LTBP4-227	ENST00000600026	LAMA3	Q16787	3333 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	KIAA1671	Q9BY89	1806 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	BICDL2	A1A5D9	508 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	TOM1L1	O75674	476 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	CCNE1	P24864	410 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	SLC39A4	Q6P5W5	647 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	MPZL3	Q6UWV2	235 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	C11orf57	Q6ZUT1	292 aa	Predicted RBP	23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	MRPL10	Q7Z7H8	261 aa	Known RBP	23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	LPP	Q93052	612 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	P2RX5	Q93086	422 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZBTB45	Q96K62	511 aa	Predicted RBP	23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	GBP3	Q9H0R5	595 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	CDT1	Q9H211	546 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	NXF3	Q9H4D5	531 aa	Known RBP	23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	RC3H2	Q9HBD1	1191 aa	Known RBP	23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	RNF19A	Q9NV58	838 aa		23.99	■■□□□ 1.43
LTBP4-227	ENST00000600026	CALU	O43852	315 aa	Predicted RBP	23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	EOMES	O95936	686 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	GATM	P50440	423 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	HTRA4	P83105	476 aa	Predicted RBP	23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	HS2ST1	Q7LGA3	356 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZBTB33	Q86T24	672 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	GOLGA5	Q8TBA6	731 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	PGBD4	Q96DM1	585 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	TYW1	Q9NV66	732 aa	Known RBP	23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	CGN	Q9P2M7	1197 aa	Known RBP	23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	RWDD2A	Q9UIY3	292 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	HES2	Q9Y543	173 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	ZMYM2	Q9UBW7	1377 aa		23.98	■■□□□ 1.43
LTBP4-227	ENST00000600026	MEIS3P2	A8K0S8	358 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	TISP43	B9A030	160 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	ANKRD63	C9JTQ0	380 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	PDXK	O00764	312 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	TLL1	O43897	1013 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	DGKI	O75912	1065 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	FGFR1	P11362	822 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	HARS	P12081	509 aa	Known RBP	23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	HOXD13	P35453	343 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	SNRPF	P62306	86 aa	Known RBP	23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	NOLC1	Q14978	699 aa	Known RBP eCLIP	23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	RALGAPA2	Q2PPJ7	1873 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	CENPP	Q6IPU0	288 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	YME1L1	Q96TA2	773 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	RAD9A	Q99638	391 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	TCHP	Q9BT92	498 aa		23.97	■■□□□ 1.43
LTBP4-227	ENST00000600026	APOL6	Q9BWW8	343 aa		23.97	■■□□□ 1.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms