RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MAGEA9P43362 315 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 PHKA2P46019 1235 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 CLK2P49760 499 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 ABHD15Q6UXT9 468 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 CYP26C1Q6V0L0 522 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 TPRG1Q6ZUI0 275 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 PALB2Q86YC2 1186 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 GLYCTKQ8IVS8 523 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 NLRP7Q8WX94 980 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 TNFRSF25Q93038 417 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 KXD1Q9BQD3 176 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 C6orf50Q9HD87 102 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 PCDHA4Q9UN74 947 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 ASPMQ8IZT6 3477 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 CARNS1A5YM72 827 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 H3BQV1 296 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 RETP07949 1114 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 DARSP14868 501 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 ADCY7P51828 1080 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 NUCB2P80303 420 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 SHC2P98077 582 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 MTAPQ13126 283 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 EFCAB12Q6NXP0 572 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 MIS18BP1Q6P0N0 1132 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 DIS3L2Q8IYB7 885 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 BLIDQ8IZY5 108 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 DDX1Q92499 740 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 RPS6KC1Q96S38 1066 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 OSBPL6Q9BZF3 934 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 FOXP1Q9H334 677 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 DPP7Q9UHL4 492 aa15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-218ENST00000598907 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 BTBD18B2RXH4 712 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 ZZEF1O43149 2961 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 FSHRP23945 695 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 KRT2P35908 639 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 GPC3P51654 580 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 CSRP2Q16527 193 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 UNQ6494/PRO21346Q6UXR6 183 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 URGCPQ8TCY9 931 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 OXER1Q8TDS5 423 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 HERC2P3Q9BVR0 1158 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 SETXQ7Z333 2677 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-218ENST00000598907 CNOT1A5YKK6 2376 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 IGF2RP11717 2491 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 DDHD2O94830 711 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 SOD2P04179 222 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 TMOD1P28289 359 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 GLUD2P49448 558 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 NTHL1P78549 312 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 RESTQ13127 1097 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 SAFBQ15424 915 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 TAS1R1Q7RTX1 841 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 FAM126AQ9BYI3 521 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
SHKBP1-218ENST00000598907 SOBPA7XYQ1 873 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 NCAM2O15394 837 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 LRP3O75074 770 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 OFD1O75665 1012 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 F13A1P00488 732 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 PFKPQ01813 784 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 SRSF5Q13243 272 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 NR5A1Q13285 461 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 SIM2Q14190 667 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 GRASPQ7Z6J2 395 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 REXO1Q8N1G1 1221 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 CLDN23Q96B33 292 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 PRKD2Q9BZL6 878 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 ZSCAN16Q9H4T2 348 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 STK39Q9UEW8 545 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 TCEAL9Q9UHQ7 104 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 CDH7Q9ULB5 785 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
SHKBP1-218ENST00000598907 NRP1O14786 923 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 MAGEB2O15479 319 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 TGM5O43548 720 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 POMCP01189 267 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 ZNF76P36508 570 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 AFF1P51825 1210 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 MTSS1LQ765P7 747 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 NOSTRINQ8IVI9 506 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms