RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CNTNAP2Q9UHC6 1331 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 TRANK1O15050 2925 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 CLIC2O15247 247 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 HOXA11P31270 313 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 ERVK-21P61565 698 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 BMT2Q1RMZ1 405 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 ANO6Q4KMQ2 910 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 UBXN11Q5T124 520 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 ADSSL1Q8N142 457 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 SYAP1Q96A49 352 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 NTPCRQ9BSD7 190 aaKnown RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 KCTD10Q9H3F6 313 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 C17orf75Q9HAS0 396 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 PRDM6Q9NQX0 595 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 RMND1Q9NWS8 449 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 SEL1LQ9UBV2 794 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 LRFN2Q9ULH4 789 aa10.57□□□□□ -0.72
DDX39A-220ENST00000593008 PIN4Q9Y237 131 aaKnown RBP10.57□□□□□ -0.72
DDX39A-220ENST00000593008 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 GOLGA8IPA6NC78 632 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 GOLGA8JA6NMD2 632 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 MEIS3P2A8K0S8 358 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 K7ERI5 159 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 DLL1O00548 723 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ACKR2O00590 384 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 HNRNPDLO14979 420 aaKnown RBP10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ASAP2O43150 1006 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 LPXNO60711 386 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 DGKIO75912 1065 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 CSPG5O95196 566 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 NPTXRO95502 500 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ADSSP30520 456 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 SMTNP53814 917 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 WNT7BP56706 349 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 PRPF4BQ13523 1007 aaKnown RBP10.56□□□□□ -0.72
DDX39A-220ENST00000593008 BTG3Q14201 252 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-220ENST00000593008 STX1AQ16623 288 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 MAPK6Q16659 721 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ZCWPW2Q504Y3 356 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 EPC2Q52LR7 807 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 HSP90AA4PQ58FG1 418 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 SRGAP1Q7Z6B7 1085 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 NPAS4Q8IUM7 802 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 FIBCD1Q8N539 461 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ZNF507Q8TCN5 953 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 BICD1Q96G01 975 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 CCDC34Q96HJ3 373 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 NFKBIZQ9BYH8 718 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 C2orf40Q9H1Z8 148 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 CDT1Q9H211 546 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 ST6GALNAC4Q9H4F1 302 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 PCIF1Q9H4Z3 704 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 AGPAT3Q9NRZ7 376 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 RGS18Q9NS28 235 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 AGPAT5Q9NUQ2 364 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 HES2Q9Y543 173 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
DDX39A-220ENST00000593008 REV3LO60673 3130 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 C9IYK1 514 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ERLIN2O94905 339 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 STAG3L1P0CL83 205 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 FGFR1P11362 822 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ZSCAN20P17040 1043 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 CTNNB1P35222 781 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 TNFSF9P41273 254 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 CYP2J2P51589 502 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 OSTNP61366 133 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 DSC3Q14574 896 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ATF7IP2Q5U623 682 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ANKRD40Q6AI12 368 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 SLC24A5Q71RS6 500 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 GAS2L3Q86XJ1 694 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 SYCP3Q8IZU3 236 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 GUF1Q8N442 669 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 NOC3LQ8WTT2 800 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 LPPQ93052 612 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ZNF689Q96CS4 500 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 ACCSQ96QU6 501 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms