RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 SPATA20Q8TB22 786 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 CASD1Q96PB1 797 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
TPM4-215ENST00000592138 EIF2AQ9BY44 585 aaKnown RBP10.66□□□□□ -0.7
TPM4-215ENST00000592138 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
TPM4-215ENST00000592138 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 EXOC7Q9UPT5 735 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 STYXL1Q9Y6J8 313 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 TCHHQ07283 1943 aa10.66□□□□□ -0.7
TPM4-215ENST00000592138 PTPRSQ13332 1948 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 LCHNA4D1U4 455 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 LINC01553A4QN01 128 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 RBAK-RBAKDNI3L0D1 243 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 HNRNPDLO14979 420 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 CLDN3O15551 220 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 PRPF40AO75400 957 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 OFD1O75665 1012 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 RHOBTB3O94955 611 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 NPTXRO95502 500 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 RPN1P04843 607 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 LINC00271P0C7V0 271 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 FGFR1P11362 822 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ITGA4P13612 1032 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 LIG1P18858 919 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 GRM5P41594 1212 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 LIG4P49917 911 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 CASP5P51878 434 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ERVK-21P61565 698 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 SNRPFP62306 86 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 POU5F1Q01860 360 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 TAP1Q03518 808 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 BTG3Q14201 252 aaPredicted RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 NOLC1Q14978 699 aaKnown RBP eCLIP10.65□□□□□ -0.7
TPM4-215ENST00000592138 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ZC2HC1CQ53FD0 456 aaPredicted RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 CLLU1OSQ5K130 101 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ZNF697Q5TEC3 545 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 EEF1DP3Q658K8 133 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 PPP2R2DQ66LE6 453 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 FAM117BQ6P1L5 589 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 FIBCD1Q8N539 461 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 BICD1Q96G01 975 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 GUCD1Q96NT3 240 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 ACCSQ96QU6 501 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 CDT1Q9H211 546 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 NKX2-4Q9H2Z4 354 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 NXF3Q9H4D5 531 aaKnown RBP10.65□□□□□ -0.7
TPM4-215ENST00000592138 RSAD1Q9HA92 442 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 EXOC1Q9NV70 894 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 KANSL3Q9P2N6 904 aa10.65□□□□□ -0.7
TPM4-215ENST00000592138 A0A0B4J269 797 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 TBKBP1A7MCY6 615 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 C5orf67F2Z3F1 127 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 KIAA0391O15091 583 aaKnown RBP10.64□□□□□ -0.71
TPM4-215ENST00000592138 RB1P06400 928 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 MYBP10242 640 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 MYOGP15173 224 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 CASP1P29466 404 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 KMT5BQ4FZB7 885 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 CDR2LQ86X02 465 aaPredicted RBP10.64□□□□□ -0.71
TPM4-215ENST00000592138 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 TMEM174Q8WUU8 243 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 GSDMAQ96QA5 445 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 TGS1Q96RS0 853 aaKnown RBP10.64□□□□□ -0.71
TPM4-215ENST00000592138 PLVAPQ9BX97 442 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 RMND1Q9NWS8 449 aa10.64□□□□□ -0.71
TPM4-215ENST00000592138 CGNQ9P2M7 1197 aaKnown RBP10.64□□□□□ -0.71
TPM4-215ENST00000592138 ARL5CA6NH57 179 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 FAM189A1O60320 539 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 RECQL4O94761 1208 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 ARHGEF15O94989 841 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 KIF20AO95235 890 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 SMC2O95347 1197 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 LAG3P18627 525 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 GARTP22102 1010 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 COBLL1Q53SF7 1204 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 SLC39A4Q6P5W5 647 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 KIAA0895Q8NCT3 520 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 SCFD1Q8WVM8 642 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 LPPQ93052 612 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 P2RX5Q93086 422 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 TSPAN18Q96SJ8 248 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 TCHPQ9BT92 498 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms