RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CHST7Q9NS84 486 aa24.33■■□□□ 1.49
CAPNS1-205ENST00000588780 HES2Q9Y543 173 aa24.33■■□□□ 1.49
CAPNS1-205ENST00000588780 MAGEA9P43362 315 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 NPEPPSP55786 919 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 PPM1LQ5SGD2 360 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 TSSK4Q6SA08 328 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 CEP170P1Q96L14 293 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 ZFP42Q96MM3 310 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 KXD1Q9BQD3 176 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 EIF2AQ9BY44 585 aaKnown RBP24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 GPR62Q9BZJ7 368 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 TRIM6Q9C030 488 aaPredicted RBP24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 RNF39Q9H2S5 420 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 LTB4R2Q9NPC1 389 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 FNIP2Q9P278 1114 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 RAB23Q9ULC3 237 aa24.32■■□□□ 1.48
CAPNS1-205ENST00000588780 NCAM2O15394 837 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 PRPF3O43395 683 aaKnown RBP24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 TADA2AO75478 443 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 C1RP00736 705 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 RCAN1P53805 252 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 DSC1Q08554 894 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 LAMTOR4Q0VGL1 99 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 LILRA6Q6PI73 481 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 EXOC8Q8IYI6 725 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 HACE1Q8IYU2 909 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 RNF149Q8NC42 400 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 TBCKQ8TEA7 893 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 RABGGTAQ92696 567 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 FGF13Q92913 245 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 PHF20Q9BVI0 1012 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 OSBPL6Q9BZF3 934 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 EPC1Q9H2F5 836 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 MIOSQ9NXC5 875 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 VPS54Q9P1Q0 977 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 MYH15Q9Y2K3 1946 aa24.31■■□□□ 1.48
CAPNS1-205ENST00000588780 MTCL1Q9Y4B5 1905 aaKnown RBP24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 TBC1D4O60343 1298 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 KCNA4P22459 653 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 NLRP5P59047 1200 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 PRSS55Q6UWB4 352 aaPredicted RBP24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 TPRG1Q6ZUI0 275 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 ZBTB44Q8NCP5 570 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 DDX23Q9BUQ8 820 aaKnown RBP24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 ADAM28Q9UKQ2 775 aa24.3■■□□□ 1.48
CAPNS1-205ENST00000588780 CCL16O15467 120 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 XYLBO75191 536 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 TDP2O95551 362 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 EFEMP2O95967 443 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 Q4G0T1 1027 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 NOTUMQ6P988 496 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 RSPO2Q6UXX9 243 aaPredicted RBP24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 CEP57Q86XR8 500 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 CPB2Q96IY4 423 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 SLC26A6Q9BXS9 759 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 COL4A3Q01955 1670 aa24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 MAP1BP46821 2468 aaKnown RBP24.29■■□□□ 1.48
CAPNS1-205ENST00000588780 EDIL3O43854 480 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 DKC1O60832 514 aaKnown RBP eCLIP24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 PAPLNO95428 1278 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 HNRNPA1P09651 372 aaKnown RBP eCLIP24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 QARSP47897 775 aaKnown RBP24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 LPAL2Q16609 132 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 ADCK5Q3MIX3 580 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 TCP11Q8WWU5 503 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 NELL2Q99435 816 aa24.28■■□□□ 1.48
CAPNS1-205ENST00000588780 C8AP07357 584 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 ADRB1P08588 477 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 AXLP30530 894 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 RFC5P40937 340 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 KRT32Q14532 448 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 GPR65Q8IYL9 337 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 ZNF579Q8NAF0 562 aaKnown RBP24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 ITFG1Q8TB96 612 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 C22orf23Q9BZE7 217 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 FBXW11Q9UKB1 542 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 MRPS17Q9Y2R5 130 aaKnown RBP24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 GIT1Q9Y2X7 761 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 DOCK6Q96HP0 2047 aa24.27■■□□□ 1.48
CAPNS1-205ENST00000588780 INO80B-WBP1J3KQ70 363 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 ASAP2O43150 1006 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 TSPAN1O60635 241 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 LILRB5O75023 590 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 AKAP5P24588 427 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 TARSP26639 723 aaKnown RBP24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 SPEM2Q0P670 501 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 PPM1JQ5JR12 505 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 ZNF852Q6ZMS4 543 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 HASPINQ8TF76 798 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 CCDC51Q96ER9 411 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 MBOAT7Q96N66 472 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 CSRNP2Q9H175 543 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 KLK14Q9P0G3 267 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 PARP2Q9UGN5 583 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 SF3B1O75533 1304 aaKnown RBP eCLIP24.26■■□□□ 1.479e-10■■■■□ 24.3
CAPNS1-205ENST00000588780 PATJQ8NI35 1801 aa24.26■■□□□ 1.47
CAPNS1-205ENST00000588780 TDRD15B5MCY1 1934 aaKnown RBP24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 HMGB1P09429 215 aaKnown RBP24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 EMC2Q15006 297 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms