RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PHGDHO43175 533 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 ARIH2O95376 493 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 HNRNPLP14866 589 aaKnown RBP eCLIP6.7□□□□□ -1.349e-9■■■■■ 31.2
TUBD1-208ENST00000588009 TAL1P17542 331 aaPredicted RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 SYN1P17600 705 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 RPL17P18621 184 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 TNFSF4P23510 183 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 ADCY8P40145 1251 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 MC3RP41968 323 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 ITGA1P56199 1179 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 TARDBPQ13148 414 aaKnown RBP eCLIP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 PLS1Q14651 629 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 RALBP1Q15311 655 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 KHDC1Q4VXA5 237 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 DGKKQ5KSL6 1271 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 STK32CQ86UX6 486 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 IL31RAQ8NI17 732 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 SMARCC2Q8TAQ2 1214 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 ANKS1AQ92625 1134 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 NKD2Q969F2 451 aaPredicted RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 MTFMTQ96DP5 389 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 SLC35A4Q96G79 324 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 MRGPRX4Q96LA9 322 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 CLIC6Q96NY7 704 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 WDR12Q9GZL7 423 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 MANSC1Q9H8J5 431 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 ARFGAP3Q9NP61 516 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 PNPOQ9NVS9 261 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 Q9UFV3 132 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 CORO2BQ9UQ03 480 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 SNX13Q9Y5W8 968 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 OAS3Q9Y6K5 1087 aaKnown RBP6.7□□□□□ -1.34
TUBD1-208ENST00000588009 PRAMEF4O60810 478 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 GAAP10253 952 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 TYRP14679 529 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 ATF2P15336 505 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 ECHS1P30084 290 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 ZNF543Q08ER8 600 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 RAB39AQ14964 217 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 RTP5Q14D33 572 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 MST1LQ2TV78 715 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 B3GNT8Q7Z7M8 397 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 RSPH3Q86UC2 560 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 UNC5BQ8IZJ1 945 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 PIK3C3Q8NEB9 887 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 PNISRQ8TF01 805 aaKnown RBP6.69□□□□□ -1.34
TUBD1-208ENST00000588009 ZSWIM3Q96MP5 696 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 VRK1Q99986 396 aaPredicted RBP6.69□□□□□ -1.34
TUBD1-208ENST00000588009 GORASP1Q9BQQ3 440 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 CRB3Q9BUF7 120 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 MAF1Q9H063 256 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 VPS11Q9H270 941 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 KIAA1586Q9HCI6 787 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 GNL3LQ9NVN8 582 aaKnown RBP6.69□□□□□ -1.34
TUBD1-208ENST00000588009 LUZP4Q9P127 313 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 CALCOCO1Q9P1Z2 691 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 FBXO10Q9UK96 956 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 MORC2Q9Y6X9 1032 aaPredicted RBP6.69□□□□□ -1.34
TUBD1-208ENST00000588009 USP19O94966 1318 aa6.69□□□□□ -1.34
TUBD1-208ENST00000588009 FOXN3O00409 490 aaPredicted RBP6.68□□□□□ -1.34
TUBD1-208ENST00000588009 NPHP1O15259 732 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 CHGBP05060 677 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 PPM1FP49593 454 aaPredicted RBP6.68□□□□□ -1.34
TUBD1-208ENST00000588009 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
TUBD1-208ENST00000588009 FAM209BQ5JX69 171 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 IZUMO3Q5VZ72 239 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 LDHDQ86WU2 507 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 SMAP1Q8IYB5 467 aaPredicted RBP6.68□□□□□ -1.34
TUBD1-208ENST00000588009 SH2D3CQ8N5H7 860 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 CYFIP2Q96F07 1278 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 WRNIP1Q96S55 665 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 BCO1Q9HAY6 547 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 STARD7Q9NQZ5 370 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 ABCF2Q9UG63 623 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 CROTQ9UKG9 612 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 CDC42EP3Q9UKI2 254 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 LRCH1Q9Y2L9 728 aa6.68□□□□□ -1.34
TUBD1-208ENST00000588009 A0A1W2PPL8 197 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 H0Y858 1186 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 NCK2O43639 380 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 WDHD1O75717 1129 aaPredicted RBP6.67□□□□□ -1.34
TUBD1-208ENST00000588009 PAPLNO95428 1278 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 KNG1P01042 644 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 GLI1P08151 1106 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 MALP21145 153 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 ABCB4P21439 1286 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 PPM1AP35813 382 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 IL6STP40189 918 aaPredicted RBP6.67□□□□□ -1.34
TUBD1-208ENST00000588009 STT3AP46977 705 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 NCKAP1LP55160 1127 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 PER3P56645 1201 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 SNAPC2Q13487 334 aa6.67□□□□□ -1.34
TUBD1-208ENST00000588009 TRIM14Q14142 442 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms