RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GATMP50440 423 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 MAP4K3Q8IVH8 894 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 CEP57L1Q8IYX8 460 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 TSPAN18Q96SJ8 248 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 NSUN3Q9H649 340 aaKnown RBP15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 SPG21Q9NZD8 308 aa15.15■□□□□ 0.02
PRKCSH-202ENST00000585540 A0A087X0B3 334 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 MYMKA6NI61 221 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 FGF18O76093 207 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 LIG1P18858 919 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 YARSP54577 528 aaKnown RBP15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 NOLC1Q14978 699 aaKnown RBP eCLIP15.14■□□□□ 0.016e-10■□□□□ 8.3
PRKCSH-202ENST00000585540 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 SLFN12LQ6IEE8 588 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 TAS1R3Q7RTX0 852 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 SLC39A11Q8N1S5 342 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 PDILTQ8N807 584 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 KLHL23Q8NBE8 558 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 MRPS27Q92552 414 aaKnown RBP15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 LPPQ93052 612 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 DHX58Q96C10 678 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 TMEM169Q96HH4 297 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 FIZ1Q96SL8 496 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 NXF3Q9H4D5 531 aaKnown RBP15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 KCNH3Q9ULD8 1083 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 COG5Q9UP83 839 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 PCDHB13Q9Y5F0 798 aa15.14■□□□□ 0.01
PRKCSH-202ENST00000585540 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 TCHHQ07283 1943 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 POLR2DO15514 142 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 CLDN3O15551 220 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 ITGB1P05556 798 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 LIG4P49917 911 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 MCL1Q07820 350 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 LRRC55Q6ZSA7 311 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 DYMQ7RTS9 669 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 SPPL3Q8TCT6 385 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 BICD1Q96G01 975 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 CDCA3Q99618 268 aaPredicted RBP15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 C7orf25Q9BPX7 421 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 TRIM9Q9C026 710 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 CDT1Q9H211 546 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 NGRNQ9NPE2 291 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 PARP2Q9UGN5 583 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 TBX20Q9UMR3 447 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 HPSEQ9Y251 543 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 INPP5FQ9Y2H2 1132 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 UBE4BO95155 1302 aa15.13■□□□□ 0.01
PRKCSH-202ENST00000585540 NPHP3-ACAD11A0A0J9YXS1 232 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 KIAA0391O15091 583 aaKnown RBP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 PPP1R37O75864 691 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 RECQL4O94761 1208 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 ALDH2P05091 517 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 IDEP14735 1019 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 MLH1P40692 756 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 BCAR1P56945 870 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 DSC1Q08554 894 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 POSTNQ15063 836 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 AAK1Q2M2I8 961 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 ZNF720Q7Z2F6 126 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 SPRED2Q7Z698 418 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 GPR65Q8IYL9 337 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 POF1BQ8WVV4 589 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 UROC1Q96N76 676 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 GAD1Q99259 594 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 TCHPQ9BT92 498 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 MRPL44Q9H9J2 332 aaKnown RBP15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 PLEKHA5Q9HAU0 1116 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
PRKCSH-202ENST00000585540 GOLGA6L4A6NEF3 574 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 RFXAPO00287 272 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 ABLIM1O14639 778 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms