RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 HOXA11P31270 313 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 CIITAP33076 1130 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 MTAPQ13126 283 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 PFKFB3Q16875 520 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 MTSS1LQ765P7 747 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 NELL1Q92832 810 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 SLC5A5Q92911 643 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 EIF2AQ9BY44 585 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 OSBPL6Q9BZF3 934 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 LSG1Q9H089 658 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 NDRG2Q9UN36 371 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 IPPQ9Y573 584 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 ZFP37Q9Y6Q3 630 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 ATRXP46100 2492 aa15.83■□□□□ 0.12
CSNK1D-224ENST00000584672 RALGAPA1Q6GYQ0 2036 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 SLC30A4O14863 429 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 EDIL3O43854 480 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 PAPLNO95428 1278 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 NCLP19338 710 aaKnown RBP15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 MAGEA9P43362 315 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 NPEPPSP55786 919 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 PFKPQ01813 784 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 DSC1Q08554 894 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 COL9A2Q14055 689 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 USP41Q3LFD5 358 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 PPM1LQ5SGD2 360 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 NETO1Q8TDF5 533 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 TMEM143Q96AN5 459 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 BORCS6Q96GS4 357 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 RIT2Q99578 217 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 COLEC11Q9BWP8 271 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 ZMYND12Q9H0C1 365 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 PRMT8Q9NR22 394 aaPredicted RBP15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 HEBP1Q9NRV9 189 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
CSNK1D-224ENST00000584672 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 GDF9O60383 454 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 NR1I2O75469 434 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 C8AP07357 584 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 LIN9Q5TKA1 542 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 ANO5Q75V66 913 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 HASPINQ8TF76 798 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 PRPF31Q8WWY3 499 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 CLDN23Q96B33 292 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 MBOAT7Q96N66 472 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 FNIP2Q9P278 1114 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 FBXW11Q9UKB1 542 aa15.81■□□□□ 0.12
CSNK1D-224ENST00000584672 NCAM2O15394 837 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 PSMD10O75832 226 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 RTP2Q5QGT7 225 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 LAIR1Q6GTX8 287 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 RSPO2Q6UXX9 243 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 PLA2G2FQ9BZM2 168 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 UBN1Q9NPG3 1134 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 ADAM28Q9UKQ2 775 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 NOTCH4Q99466 2003 aa15.8■□□□□ 0.12
CSNK1D-224ENST00000584672 ADAM12O43184 909 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 TADA2AO75478 443 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 ERLIN2O94905 339 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 AKAP5P24588 427 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 DMWDQ09019 674 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 LAMTOR4Q0VGL1 99 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 FZD5Q13467 585 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 ZNF852Q6ZMS4 543 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 SRGAP1Q7Z6B7 1085 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 SLC7A14Q8TBB6 771 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 CCDC12Q8WUD4 166 aaPredicted RBP15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 MCRS1Q96EZ8 462 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 NXF3Q9H4D5 531 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 SEMA4GQ9NTN9 838 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 KLK14Q9P0G3 267 aa15.79■□□□□ 0.12
CSNK1D-224ENST00000584672 FAM208BQ5VWN6 2430 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 TSPAN1O60635 241 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 TDP2O95551 362 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 HNRNPA1P09651 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 TDGF1P13385 188 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 GNA11P29992 359 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 RPS9P46781 194 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 SRSF5Q13243 272 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 AAMPQ13685 434 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 NECTIN1Q15223 517 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 PRR23CQ6ZRP0 262 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 CDR2LQ86X02 465 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 RNF149Q8NC42 400 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 CNNM3Q8NE01 707 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 RDM1Q8NG50 284 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 PSPC1Q8WXF1 523 aaKnown RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 SLC7A3Q8WY07 619 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 CLSTN3Q9BQT9 956 aa15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 JPH2Q9BR39 696 aaPredicted RBP15.78■□□□□ 0.12
CSNK1D-224ENST00000584672 PAAF1Q9BRP4 392 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms