RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
SS18-219ENST00000581570 GPR62Q9BZJ7 368 aa14.24□□□□□ -0.13
SS18-219ENST00000581570 USP18Q9UMW8 372 aa14.24□□□□□ -0.13
SS18-219ENST00000581570 SMG5Q9UPR3 1016 aaKnown RBP14.24□□□□□ -0.13
SS18-219ENST00000581570 FRYLO94915 3013 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 NTHL1P78549 312 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 PFKPQ01813 784 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 CREMQ03060 361 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 LAMTOR4Q0VGL1 99 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 ST3GAL2Q16842 350 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 ADCK5Q3MIX3 580 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 ZBTB41Q5SVQ8 909 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 RSPO2Q6UXX9 243 aaPredicted RBP14.23□□□□□ -0.13
SS18-219ENST00000581570 EXOC8Q8IYI6 725 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 TBCKQ8TEA7 893 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 CEP170P1Q96L14 293 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 ZFP42Q96MM3 310 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 MBOAT7Q96N66 472 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 EIF2AQ9BY44 585 aaKnown RBP14.23□□□□□ -0.13
SS18-219ENST00000581570 EPC1Q9H2F5 836 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 LTB4R2Q9NPC1 389 aa14.23□□□□□ -0.13
SS18-219ENST00000581570 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 LILRB5O75023 590 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 ERLIN2O94905 339 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 TDP2O95551 362 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 CD72P21854 359 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 NLRP5P59047 1200 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 TSGA10IPQ3SY00 556 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
SS18-219ENST00000581570 RNF149Q8NC42 400 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
SS18-219ENST00000581570 FGF13Q92913 245 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 APOL6Q9BWW8 343 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 C22orf23Q9BZE7 217 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 DHX33Q9H6R0 707 aaKnown RBP14.22□□□□□ -0.13
SS18-219ENST00000581570 VPS54Q9P1Q0 977 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 GIT1Q9Y2X7 761 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 HES2Q9Y543 173 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 FANCMQ8IYD8 2048 aa14.22□□□□□ -0.13
SS18-219ENST00000581570 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CYP3A7-CYP3A51PA0A087WV96 503 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 NCAM2O15394 837 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 ASAP2O43150 1006 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 DKC1O60832 514 aaKnown RBP eCLIP14.21□□□□□ -0.13
SS18-219ENST00000581570 TADA2AO75478 443 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 HMGB1P09429 215 aaKnown RBP14.21□□□□□ -0.13
SS18-219ENST00000581570 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
SS18-219ENST00000581570 TGM1P22735 817 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CYP3A7P24462 503 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 AXLP30530 894 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 QARSP47897 775 aaKnown RBP14.21□□□□□ -0.13
SS18-219ENST00000581570 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
SS18-219ENST00000581570 KRT32Q14532 448 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 PPM1LQ5SGD2 360 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 LIN9Q5TKA1 542 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 NOTUMQ6P988 496 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 TSSK4Q6SA08 328 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
SS18-219ENST00000581570 HACE1Q8IYU2 909 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 ETNPPLQ8TBG4 499 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 TCP11Q8WWU5 503 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 RABGGTAQ92696 567 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 NELL1Q92832 810 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CLDN23Q96B33 292 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CCDC51Q96ER9 411 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CPB2Q96IY4 423 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 NELL2Q99435 816 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 PHF20Q9BVI0 1012 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 SLC26A6Q9BXS9 759 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CSRNP2Q9H175 543 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
SS18-219ENST00000581570 FBXW11Q9UKB1 542 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 GMEB2Q9UKD1 530 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 POLIQ9UNA4 740 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 PPME1Q9Y570 386 aa14.21□□□□□ -0.13
SS18-219ENST00000581570 CEP250Q9BV73 2442 aa14.21□□□□□ -0.14
SS18-219ENST00000581570 DOCK8Q8NF50 2099 aa14.21□□□□□ -0.14
SS18-219ENST00000581570 EML1O00423 815 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 CCL16O15467 120 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 TSPAN1O60635 241 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 ADRB1P08588 477 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 TARSP26639 723 aaKnown RBP14.2□□□□□ -0.14
SS18-219ENST00000581570 RFC5P40937 340 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 PCBP1Q15365 356 aaKnown RBP eCLIP14.2□□□□□ -0.14
SS18-219ENST00000581570 Q6ZUG5 572 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 ITFG1Q8TB96 612 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 KXD1Q9BQD3 176 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 RNF26Q9BY78 433 aaPredicted RBP14.2□□□□□ -0.14
SS18-219ENST00000581570 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
SS18-219ENST00000581570 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
SS18-219ENST00000581570 WDR81Q562E7 1941 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 XYLBO75191 536 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 P4HBP07237 508 aaKnown RBP14.19□□□□□ -0.14
SS18-219ENST00000581570 C8AP07357 584 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 CPA1P15085 419 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 AKAP5P24588 427 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 HOXA9P31269 272 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms