RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 LYPLA2O95372 231 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 AOC1P19801 751 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 HOXA11P31270 313 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 GBP2P32456 591 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 FOXK2Q01167 660 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 GUCY1B3Q02153 619 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 DSG1Q02413 1049 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 DSC1Q08554 894 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 CTTNQ14247 550 aaKnown RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 CALCRLQ16602 461 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 SLC27A1Q6PCB7 646 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 TPH2Q8IWU9 490 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 HAS1Q92839 578 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 NKD2Q969F2 451 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 PRIMPOLQ96LW4 560 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 WDR6Q9NNW5 1121 aaKnown RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 MARCH5Q9NX47 278 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 ZDHHC7Q9NXF8 308 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 WRAP73Q9P2S5 460 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-214ENST00000580073 PCDHA12Q9UN75 941 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 CITO14578 2027 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 FANCMQ8IYD8 2048 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 TRIP11Q15643 1979 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 FAM205CA6NFA0 338 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 NEMFO60524 1076 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 LILRB3O75022 631 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 SCNN1GP51170 649 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 SPIRE1Q08AE8 756 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 USP41Q3LFD5 358 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 ZBTB8OSQ8IWT0 167 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 RNF168Q8IYW5 571 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 SMG8Q8ND04 991 aaKnown RBP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 MCPH1Q8NEM0 835 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 SMG7Q92540 1137 aaKnown RBP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 TNFRSF25Q93038 417 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 GAD1Q99259 594 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 EIF2AK1Q9BQI3 630 aaKnown RBP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 APOL6Q9BWW8 343 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 KCNK12Q9HB15 430 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 PIDD1Q9HB75 910 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 RXFP1Q9HBX9 757 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 ZFP37Q9Y6Q3 630 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 SF3B1O75533 1304 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAF4-214ENST00000580073 MYH11P35749 1972 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 USP34Q70CQ2 3546 aa14.82□□□□□ -0.04
TRAF4-214ENST00000580073 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 PRR23AA6NEV1 266 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 K7ELQ4 463 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 TEX28O15482 410 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 B4GALT3O60512 393 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 GJB2P29033 226 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 MBTD1Q05BQ5 628 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 NR5A1Q13285 461 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 CAPSQ13938 189 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 CWF19L1Q69YN2 538 aaKnown RBP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 FUT10Q6P4F1 479 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 PDXDC1Q6P996 788 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 CCDC105Q8IYK2 499 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 EIF2AQ9BY44 585 aaKnown RBP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 C2orf40Q9H1Z8 148 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 PRMT7Q9NVM4 692 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAF4-214ENST00000580073 FNIP2Q9P278 1114 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 EPS15L1Q9UBC2 864 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 WNT16Q9UBV4 365 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 ADAM28Q9UKQ2 775 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 VWA8A3KMH1 1905 aa14.81□□□□□ -0.04
TRAF4-214ENST00000580073 XRCC6P12956 609 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 ARF4P18085 180 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 HMGN5P82970 282 aaKnown RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 ELAVL2Q12926 359 aaKnown RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 TMEM132AQ24JP5 1023 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 KIAA0319Q5VV43 1072 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 APBB1IPQ7Z5R6 666 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 SIX5Q8N196 739 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 CPB2Q96IY4 423 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 SNX27Q96L92 541 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 ADPGKQ9BRR6 497 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 POLR3FQ9H1D9 316 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 SMOC2Q9H3U7 446 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 NXF3Q9H4D5 531 aaKnown RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 TTC12Q9H892 705 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-214ENST00000580073 XPNPEP1Q9NQW7 623 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 FAM186AA6NE01 2351 aa14.8□□□□□ -0.04
TRAF4-214ENST00000580073 LRRIQ4A6NIV6 560 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 BTBD18B2RXH4 712 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 STK25O00506 426 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 WNT7AO00755 349 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 SLITRK3O94933 977 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 PAPLNO95428 1278 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 SRFP11831 508 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 ARL2P36404 184 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 RARRES1P49788 294 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 PDCD11Q14690 1871 aaKnown RBP14.79□□□□□ -0.04
TRAF4-214ENST00000580073 LIN9Q5TKA1 542 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 KANK3Q6NY19 840 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms