RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 RETP07949 1114 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 POU2F2P09086 479 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 FCARP24071 287 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 CDC27P30260 824 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 MCM5P33992 734 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 SETQ01105 290 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 DMWDQ09019 674 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 CSRP2Q16527 193 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 LPAL2Q16609 132 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 ZBTB41Q5SVQ8 909 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 LAIR1Q6GTX8 287 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 RHPN2Q8IUC4 686 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 PGBD4Q96DM1 585 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 RXFP3Q9NSD7 469 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 F5P12259 2224 aa12.55□□□□□ -0.4
SUPT4H1-203ENST00000579289 OR1G1P47890 313 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 EXOSC10Q01780 885 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 NECTIN1Q15223 517 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 PRR16Q569H4 304 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 TPRG1Q6ZUI0 275 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 CATSPER4Q7RTX7 472 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 CELF5Q8N6W0 485 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 LNX1Q8TBB1 728 aaPredicted RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 URGCPQ8TCY9 931 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 CHAMP1Q96JM3 812 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 GAD1Q99259 594 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 RIT2Q99578 217 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 PAAF1Q9BRP4 392 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 PIDD1Q9HB75 910 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 HEBP1Q9NRV9 189 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 HCFC1R1Q9NWW0 138 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 ANGPTL2Q9UKU9 493 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 IPPQ9Y573 584 aa12.54□□□□□ -0.4
SUPT4H1-203ENST00000579289 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 VWA8A3KMH1 1905 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 SLC27A2O14975 620 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 PROS1P07225 676 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 HOXA9P31269 272 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 MLH1P40692 756 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 SCNN1GP51170 649 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 AMHR2Q16671 573 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 FUT10Q6P4F1 479 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 PHKBQ93100 1093 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 NELL2Q99435 816 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 HES2Q9Y543 173 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 IGF2RP11717 2491 aa12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
SUPT4H1-203ENST00000579289 ITPR1Q14643 2758 aa12.52□□□□□ -0.4
SUPT4H1-203ENST00000579289 TDRD15B5MCY1 1934 aaKnown RBP12.52□□□□□ -0.4
SUPT4H1-203ENST00000579289 FREM2Q5SZK8 3169 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 K7ESF4 209 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 ECI2O75521 394 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 HNRNPA1P09651 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 SFNP31947 248 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 LIMK1P53667 647 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 SRSF5Q13243 272 aaKnown RBP12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 NAB2Q15742 525 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 SLC5A9Q2M3M2 681 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 MTSS1LQ765P7 747 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 CXCL16Q9H2A7 254 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 NCANO14594 1321 aa12.52□□□□□ -0.41
SUPT4H1-203ENST00000579289 ARNTLO00327 626 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms