RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CNNM3Q8NE01 707 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 ST13P5Q8NFI4 369 aaPredicted RBP9.75□□□□□ -0.85
BRIP1-204ENST00000579028 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
BRIP1-204ENST00000579028 CLDN23Q96B33 292 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 JPH2Q9BR39 696 aaPredicted RBP9.75□□□□□ -0.85
BRIP1-204ENST00000579028 SH2D3AQ9BRG2 576 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 LTB4R2Q9NPC1 389 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 UBN1Q9NPG3 1134 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 MTF2Q9Y483 593 aaPredicted RBP9.75□□□□□ -0.85
BRIP1-204ENST00000579028 NCOR2Q9Y618 2525 aa9.75□□□□□ -0.85
BRIP1-204ENST00000579028 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
BRIP1-204ENST00000579028 DOCK6Q96HP0 2047 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 ITGA4P13612 1032 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 GNA11P29992 359 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 USP11P51784 963 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 EXOSC10Q01780 885 aaKnown RBP9.74□□□□□ -0.85
BRIP1-204ENST00000579028 PFKPQ01813 784 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 CREMQ03060 361 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 USP41Q3LFD5 358 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 ZBTB41Q5SVQ8 909 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 FUT10Q6P4F1 479 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 GRASPQ7Z6J2 395 aaPredicted RBP9.74□□□□□ -0.85
BRIP1-204ENST00000579028 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 NELL2Q99435 816 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 COLEC11Q9BWP8 271 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 FAM126AQ9BYI3 521 aaPredicted RBP9.74□□□□□ -0.85
BRIP1-204ENST00000579028 MINDY3Q9H8M7 445 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 PARD6AQ9NPB6 346 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 PRMT8Q9NR22 394 aaPredicted RBP9.74□□□□□ -0.85
BRIP1-204ENST00000579028 GMEB2Q9UKD1 530 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 USP18Q9UMW8 372 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 COL4A3BPQ9Y5P4 624 aa9.74□□□□□ -0.85
BRIP1-204ENST00000579028 ARL5CA6NH57 179 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 F8W810 466 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 SLC30A4O14863 429 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 NCAM2O15394 837 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 NR1I2O75469 434 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 HNRNPA1P09651 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
BRIP1-204ENST00000579028 TARSP26639 723 aaKnown RBP9.73□□□□□ -0.85
BRIP1-204ENST00000579028 HOXA9P31269 272 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 MLH1P40692 756 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 RPS9P46781 194 aaKnown RBP9.73□□□□□ -0.85
BRIP1-204ENST00000579028 ANO5Q75V66 913 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 GLYCTKQ8IVS8 523 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 BICD2Q8TD16 824 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 NETO1Q8TDF5 533 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 FGF13Q92913 245 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 GJA10Q969M2 543 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 B3GALT6Q96L58 329 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 GAD1Q99259 594 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 GPR62Q9BZJ7 368 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 MIOSQ9NXC5 875 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 FBXW11Q9UKB1 542 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 IPPQ9Y573 584 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 GPR179Q6PRD1 2367 aa9.73□□□□□ -0.85
BRIP1-204ENST00000579028 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PRPF3O43395 683 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 RPL17P18621 184 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 CD72P21854 359 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 AXLP30530 894 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 ADD1P35611 737 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 SCNN1GP51170 649 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PSMC5P62195 406 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 NTHL1P78549 312 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 FZD5Q13467 585 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 Q4G0T1 1027 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PPM1JQ5JR12 505 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PLA2G4FQ68DD2 849 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 TSSK4Q6SA08 328 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PSPC1Q8WXF1 523 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 SLC7A3Q8WY07 619 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 SPOCK2Q92563 424 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 CCDC51Q96ER9 411 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 ZFP42Q96MM3 310 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 TCEANC2Q96MN5 208 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PHF20Q9BVI0 1012 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 EIF2AQ9BY44 585 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 ADAM28Q9UKQ2 775 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 GIT1Q9Y2X7 761 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
BRIP1-204ENST00000579028 TPRP12270 2363 aaKnown RBP9.72□□□□□ -0.85
BRIP1-204ENST00000579028 SHISA7A6NL88 538 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 TSPAN1O60635 241 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 LRP3O75074 770 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 ERLIN2O94905 339 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 POU2F2P09086 479 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 SRGAP2CP0DJJ0 459 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 TDGF1P13385 188 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 NPEPPSP55786 919 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 LAMTOR4Q0VGL1 99 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 PCBP1Q15365 356 aaKnown RBP eCLIP9.71□□□□□ -0.86
BRIP1-204ENST00000579028 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.86
BRIP1-204ENST00000579028 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
BRIP1-204ENST00000579028 LIN9Q5TKA1 542 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms