RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 OTUD7AQ8TE49 926 aaPredicted RBP4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 ZFPM2Q8WW38 1151 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 AUTS2Q8WXX7 1259 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SNX21Q969T3 373 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 MUL1Q969V5 352 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SUCLG2Q96I99 432 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 MAML3Q96JK9 1138 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 DPH2Q9BQC3 489 aaPredicted RBP4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 FOXQ1Q9C009 403 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 PRDM14Q9GZV8 571 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 DHX36Q9H2U1 1008 aaKnown RBP4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 TRPV4Q9HBA0 871 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SPON1Q9HCB6 807 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SAYSD1Q9NPB0 183 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 PDRG1Q9NUG6 133 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 TMEM160Q9NX00 188 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 NOP53Q9NZM5 478 aaKnown RBP4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 WDR35Q9P2L0 1181 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 MTRRQ9UBK8 725 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 OGDHLQ9ULD0 1010 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SRPK3Q9UPE1 567 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 NR2E3Q9Y5X4 410 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 BACE2Q9Y5Z0 518 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 SYNJ1O43426 1573 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 ERCC6L2Q5T890 1561 aa4.82□□□□□ -1.64
GAPLINC-201ENST00000578664 GAPVD1Q14C86 1478 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 FGD5Q6ZNL6 1462 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 KIF13AQ9H1H9 1805 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 PBRM1Q86U86 1689 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 LCHNA4D1U4 455 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 LINC01387J3KSC0 135 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 DLL1O00548 723 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 HSPA4LO95757 839 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 LCP1P13796 627 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 FOSL1P15407 271 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 STMN1P16949 149 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 IL11P20809 199 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 PTX3P26022 381 aaPredicted RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 GRK3P35626 688 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 POLD2P49005 469 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 MAP2K6P52564 334 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ARF3P61204 181 aaPredicted RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ARF1P84077 181 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 DSC2Q02487 901 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CREMQ03060 361 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CALD1Q05682 793 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 FSTL1Q12841 308 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 BECN1Q14457 450 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TRAPPC3LQ5T215 181 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TATDN1Q6P1N9 297 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ABRAXAS1Q6UWZ7 409 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CATSPER4Q7RTX7 472 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 IQCA1Q86XH1 822 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 NME9Q86XW9 330 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 COL23A1Q86Y22 540 aaPredicted RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TRMT2AQ8IZ69 625 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TXLNBQ8N3L3 684 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TCP11L2Q8N4U5 519 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 GALNT11Q8NCW6 608 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TOR1AIP2Q8NFQ8 470 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 FAM71BQ8TC56 605 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 DLG3Q92796 817 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CENPTQ96BT3 561 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 C16orf92Q96LL3 132 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 MMP19Q99542 508 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 MCMBPQ9BTE3 642 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 BRIP1Q9BX63 1249 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 PAIP1Q9H074 479 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ABCG4Q9H172 646 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 C14orf93Q9H972 538 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ZMAT3Q9HA38 289 aaKnown RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 PRDM5Q9NQX1 630 aaPredicted RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 HAUS2Q9NVX0 235 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CRIM1Q9NZV1 1036 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 ZSWIM5Q9P217 1185 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TBC1D29Q9UFV1 150 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 B3GALT1Q9Y5Z6 326 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 WDR97A6NE52 1622 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 CUX1P39880 1505 aa4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 MAGI1Q96QZ7 1491 aaPredicted RBP4.81□□□□□ -1.64
GAPLINC-201ENST00000578664 TRBV23OR9-2A0A075B6M9 112 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 C17orf113A0A1B0GUU1 675 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 F8W8V4 182 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 FSCN2O14926 492 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 TBCAO75347 108 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 EOMESO95936 686 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 AMY2AP04746 511 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms