RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
GAPLINC-201ENST00000578664 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
GAPLINC-201ENST00000578664 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
GAPLINC-201ENST00000578664 SENP3Q9H4L4 574 aaPredicted RBP12.31□□□□□ -0.44
GAPLINC-201ENST00000578664 PLPPR3Q6T4P5 718 aa11.64□□□□□ -0.55
GAPLINC-201ENST00000578664 FOXD1Q16676 465 aa11.43□□□□□ -0.58
GAPLINC-201ENST00000578664 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
GAPLINC-201ENST00000578664 ADRA2BP18089 450 aa11.06□□□□□ -0.64
GAPLINC-201ENST00000578664 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
GAPLINC-201ENST00000578664 MSH5O43196 834 aa10.48□□□□□ -0.73
GAPLINC-201ENST00000578664 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
GAPLINC-201ENST00000578664 KCNA4P22459 653 aa10.17□□□□□ -0.78
GAPLINC-201ENST00000578664 SCAF1Q9H7N4 1312 aaKnown RBP10.09□□□□□ -0.79
GAPLINC-201ENST00000578664 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
GAPLINC-201ENST00000578664 NCBP3Q53F19 620 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-201ENST00000578664 CNKSR2Q8WXI2 1034 aa9.97□□□□□ -0.81
GAPLINC-201ENST00000578664 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
GAPLINC-201ENST00000578664 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
GAPLINC-201ENST00000578664 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
GAPLINC-201ENST00000578664 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
GAPLINC-201ENST00000578664 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
GAPLINC-201ENST00000578664 HOXD11P31277 338 aaPredicted RBP9.72□□□□□ -0.85
GAPLINC-201ENST00000578664 DNAJC5BQ9UF47 199 aa9.7□□□□□ -0.86
GAPLINC-201ENST00000578664 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
GAPLINC-201ENST00000578664 CSRNP3Q8WYN3 585 aa9.44□□□□□ -0.9
GAPLINC-201ENST00000578664 ZBTB22O15209 634 aa9.39□□□□□ -0.91
GAPLINC-201ENST00000578664 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
GAPLINC-201ENST00000578664 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
GAPLINC-201ENST00000578664 DCAF8L1A6NGE4 600 aa9.31□□□□□ -0.92
GAPLINC-201ENST00000578664 FOXD4L1Q9NU39 408 aa9.31□□□□□ -0.92
GAPLINC-201ENST00000578664 AMER1Q5JTC6 1135 aaPredicted RBP9.24□□□□□ -0.93
GAPLINC-201ENST00000578664 RTN4Q9NQC3 1192 aaKnown RBP9.19□□□□□ -0.94
GAPLINC-201ENST00000578664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.18□□□□□ -0.94
GAPLINC-201ENST00000578664 MYCNP04198 464 aaPredicted RBP9.13□□□□□ -0.95
GAPLINC-201ENST00000578664 U3KPZ7 1027 aaPredicted RBP9.11□□□□□ -0.95
GAPLINC-201ENST00000578664 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
GAPLINC-201ENST00000578664 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
GAPLINC-201ENST00000578664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.98□□□□□ -0.97
GAPLINC-201ENST00000578664 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
GAPLINC-201ENST00000578664 SAMD1Q6SPF0 538 aaPredicted RBP8.97□□□□□ -0.97
GAPLINC-201ENST00000578664 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.98
GAPLINC-201ENST00000578664 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
GAPLINC-201ENST00000578664 APLP2Q06481 763 aa8.85□□□□□ -0.99
GAPLINC-201ENST00000578664 SPINK5Q9NQ38 1064 aaPredicted RBP8.8□□□□□ -1
GAPLINC-201ENST00000578664 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
GAPLINC-201ENST00000578664 CAPN15O75808 1086 aa8.71□□□□□ -1.02
GAPLINC-201ENST00000578664 TRHP20396 242 aaPredicted RBP8.69□□□□□ -1.02
GAPLINC-201ENST00000578664 CACNB1Q02641 598 aaPredicted RBP8.63□□□□□ -1.03
GAPLINC-201ENST00000578664 POLA2Q14181 598 aa8.61□□□□□ -1.03
GAPLINC-201ENST00000578664 DSG3P32926 999 aa8.6□□□□□ -1.03
GAPLINC-201ENST00000578664 ABCB7O75027 752 aa8.56□□□□□ -1.04
GAPLINC-201ENST00000578664 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
GAPLINC-201ENST00000578664 BCANQ96GW7 911 aa8.49□□□□□ -1.05
GAPLINC-201ENST00000578664 DAXXQ9UER7 740 aaPredicted RBP8.48□□□□□ -1.05
GAPLINC-201ENST00000578664 ZBTB12Q9Y330 459 aaPredicted RBP8.48□□□□□ -1.05
GAPLINC-201ENST00000578664 FBLN2P98095 1184 aa8.46□□□□□ -1.06
GAPLINC-201ENST00000578664 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
GAPLINC-201ENST00000578664 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
GAPLINC-201ENST00000578664 FKBP8Q14318 412 aa8.43□□□□□ -1.06
GAPLINC-201ENST00000578664 TAOK2Q9UL54 1235 aa8.43□□□□□ -1.06
GAPLINC-201ENST00000578664 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
GAPLINC-201ENST00000578664 ARXQ96QS3 562 aa8.32□□□□□ -1.08
GAPLINC-201ENST00000578664 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
GAPLINC-201ENST00000578664 PROM2Q8N271 834 aa8.31□□□□□ -1.08
GAPLINC-201ENST00000578664 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
GAPLINC-201ENST00000578664 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
GAPLINC-201ENST00000578664 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
GAPLINC-201ENST00000578664 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
GAPLINC-201ENST00000578664 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
GAPLINC-201ENST00000578664 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
GAPLINC-201ENST00000578664 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
GAPLINC-201ENST00000578664 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
GAPLINC-201ENST00000578664 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
GAPLINC-201ENST00000578664 RBM42Q9BTD8 480 aaKnown RBP8.16□□□□□ -1.1
GAPLINC-201ENST00000578664 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
GAPLINC-201ENST00000578664 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
GAPLINC-201ENST00000578664 AKT1S1Q96B36 256 aa8.11□□□□□ -1.11
GAPLINC-201ENST00000578664 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
GAPLINC-201ENST00000578664 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
GAPLINC-201ENST00000578664 GTF3C3Q9Y5Q9 886 aa8.06□□□□□ -1.12
GAPLINC-201ENST00000578664 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
GAPLINC-201ENST00000578664 REM2Q8IYK8 340 aaPredicted RBP8.03□□□□□ -1.12
GAPLINC-201ENST00000578664 VASPP50552 380 aaPredicted RBP8.02□□□□□ -1.13
GAPLINC-201ENST00000578664 STAG3Q9UJ98 1225 aa8.02□□□□□ -1.13
GAPLINC-201ENST00000578664 KDM2AQ9Y2K7 1162 aa8.02□□□□□ -1.13
GAPLINC-201ENST00000578664 SPDYE1Q8NFV5 336 aaPredicted RBP7.99□□□□□ -1.13
GAPLINC-201ENST00000578664 DCAF8L2P0C7V8 631 aa7.94□□□□□ -1.14
GAPLINC-201ENST00000578664 IFNLR1Q8IU57 520 aaPredicted RBP7.94□□□□□ -1.14
GAPLINC-201ENST00000578664 PITPNM1O00562 1244 aa7.93□□□□□ -1.14
GAPLINC-201ENST00000578664 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.93□□□□□ -1.14
GAPLINC-201ENST00000578664 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
GAPLINC-201ENST00000578664 CLEC11AQ9Y240 323 aa7.89□□□□□ -1.15
GAPLINC-201ENST00000578664 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
GAPLINC-201ENST00000578664 TMEM132AQ24JP5 1023 aa7.87□□□□□ -1.15
GAPLINC-201ENST00000578664 MIER1Q8N108 512 aa7.87□□□□□ -1.15
GAPLINC-201ENST00000578664 PLCD3Q8N3E9 789 aa7.86□□□□□ -1.15
GAPLINC-201ENST00000578664 CREBZFQ9NS37 354 aa7.85□□□□□ -1.15
GAPLINC-201ENST00000578664 PKD2Q13563 968 aa7.84□□□□□ -1.15
GAPLINC-201ENST00000578664 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
GAPLINC-201ENST00000578664 MNX1P50219 401 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms