RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 TCHPQ9BT92 498 aa15.04■□□□□ -0
ERCC4-207ENST00000575156 LSM14BQ9BX40 385 aaKnown RBP15.04■□□□□ -0
ERCC4-207ENST00000575156 PTPRHQ9HD43 1115 aa15.04■□□□□ -0
ERCC4-207ENST00000575156 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
ERCC4-207ENST00000575156 MAPK13O15264 365 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 FAM189A1O60320 539 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 GNAT1P11488 350 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 PROZP22891 400 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 TNFSF9P41273 254 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 GCLMP48507 274 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 FMO5P49326 533 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 DPY19L2P1Q6NXN4 242 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 ZNF410Q86VK4 478 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 C17orf53Q8N3J3 647 aaPredicted RBP15.03■□□□□ -0
ERCC4-207ENST00000575156 PCSK9Q8NBP7 692 aaKnown RBP15.03■□□□□ -0
ERCC4-207ENST00000575156 TMEM40Q8WWA1 233 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 MFSD14AQ96MC6 490 aa15.03■□□□□ -0
ERCC4-207ENST00000575156 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.03■□□□□ -0
ERCC4-207ENST00000575156 PRMT7Q9NVM4 692 aaPredicted RBP15.03■□□□□ -0
ERCC4-207ENST00000575156 LRRIQ3A6PVS8 624 aaPredicted RBP15.02■□□□□ -0
ERCC4-207ENST00000575156 TSPAN1O60635 241 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 LRRN2O75325 713 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 NOL4O94818 638 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 ARF4P18085 180 aaPredicted RBP15.02■□□□□ -0
ERCC4-207ENST00000575156 MCL1Q07820 350 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 FAM187BQ17R55 369 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 TMEM139Q8IV31 216 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 CEP120Q8N960 986 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 PARD3BQ8TEW8 1205 aa15.02■□□□□ -0
ERCC4-207ENST00000575156 CNTNAP2Q9UHC6 1331 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 MKI67P46013 3256 aaKnown RBP15.02□□□□□ -0.01
ERCC4-207ENST00000575156 ZNF233A6NK53 670 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 SKILP12757 684 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 PON1P27169 355 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 KRT9P35527 623 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 ZNF568Q3ZCX4 644 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 LMBRD2Q68DH5 695 aaPredicted RBP15.02□□□□□ -0.01
ERCC4-207ENST00000575156 MPZL3Q6UWV2 235 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 ZSCAN30Q86W11 494 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 CDT1Q9H211 546 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 TMX1Q9H3N1 280 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 PDZD7Q9H5P4 517 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 CAPN11Q9UMQ6 739 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 TNFSF13BQ9Y275 285 aa15.02□□□□□ -0.01
ERCC4-207ENST00000575156 DLATP10515 647 aaKnown RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 DARSP14868 501 aaKnown RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 OSTNP61366 133 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 ITGA7Q13683 1181 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 TRIM14Q14142 442 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 EXOC3L4Q17RC7 722 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 SRGAP1Q7Z6B7 1085 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 TMEM192Q8IY95 271 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 PDE11AQ9HCR9 933 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 TRMT13Q9NUP7 481 aaKnown RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 RBAKQ9NYW8 714 aaPredicted RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 PTPRJQ12913 1337 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 ESPNB1AK53 854 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 MCCD1P59942 119 aaPredicted RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 MYL7Q01449 175 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 SLC9C1Q4G0N8 1177 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 GJB7Q6PEY0 223 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 THNSL1Q8IYQ7 743 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 TMEM117Q9H0C3 514 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 GANQ9H2C0 597 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 SIX2Q9NPC8 291 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 ABHD10Q9NUJ1 306 aa15.01□□□□□ -0.01
ERCC4-207ENST00000575156 AJAP1Q9UKB5 411 aaPredicted RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 LUC7L2Q9Y383 392 aaKnown RBP15.01□□□□□ -0.01
ERCC4-207ENST00000575156 OGTO15294 1046 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 TPM1P09493 284 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 HOXA11P31270 313 aaPredicted RBP15□□□□□ -0.01
ERCC4-207ENST00000575156 SNX17Q15036 470 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 FIGNQ5HY92 759 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 TAF2Q6P1X5 1199 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 GBP6Q6ZN66 633 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 SERINC5Q86VE9 423 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 SESTD1Q86VW0 696 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 CNGA4Q8IV77 575 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 TMC2Q8TDI7 906 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 ZNF516Q92618 1163 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 PRIMPOLQ96LW4 560 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 KIAA1586Q9HCI6 787 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 NLRC4Q9NPP4 1024 aa15□□□□□ -0.01
ERCC4-207ENST00000575156 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.01
ERCC4-207ENST00000575156 A0A1W2PQ45 241 aaPredicted RBP14.99□□□□□ -0.01
ERCC4-207ENST00000575156 A0A1W2PQY0 241 aa14.99□□□□□ -0.01
ERCC4-207ENST00000575156 KIAA0391O15091 583 aaKnown RBP14.99□□□□□ -0.01
ERCC4-207ENST00000575156 ERLIN2O94905 339 aa14.99□□□□□ -0.01
ERCC4-207ENST00000575156 CTSHP09668 335 aa14.99□□□□□ -0.01
ERCC4-207ENST00000575156 EIF4BP23588 611 aaKnown RBP14.99□□□□□ -0.01
ERCC4-207ENST00000575156 POLR2FP61218 127 aaKnown RBP14.99□□□□□ -0.01
ERCC4-207ENST00000575156 PSMD6Q15008 389 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms