RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 AFMP43652 599 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 ERVK-21P61565 698 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 GTF2BQ00403 316 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 GLB1LQ6UWU2 654 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 ZPBP2Q6X784 338 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 STXBP4Q6ZWJ1 553 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 UNC13DQ70J99 1090 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 SFR1Q86XK3 245 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 STAMQ92783 540 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 BICD1Q96G01 975 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 PAGE5Q96GU1 130 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 CASD1Q96PB1 797 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
CHD3-216ENST00000573936 MRPL9Q9BYD2 267 aaKnown RBP12.1□□□□□ -0.47
CHD3-216ENST00000573936 PDZD7Q9H5P4 517 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
CHD3-216ENST00000573936 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 OLFML3Q9NRN5 406 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 KANSL3Q9P2N6 904 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 MTUS1Q9ULD2 1270 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 GIT1Q9Y2X7 761 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 IPPQ9Y573 584 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 TTC3P53804 2025 aa12.1□□□□□ -0.47
CHD3-216ENST00000573936 GPR37L1O60883 481 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 TOM1L1O75674 476 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 RB1P06400 928 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 FGFR1P11362 822 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 NMT1P30419 496 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 COASYQ13057 564 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 TMEM87AQ8NBN3 555 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 SMG8Q8ND04 991 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 HELQQ8TDG4 1101 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 TARS2Q9BW92 718 aaKnown RBP12.09□□□□□ -0.47
CHD3-216ENST00000573936 GOLPH3LQ9H4A5 285 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 EXOC7Q9UPT5 735 aa12.09□□□□□ -0.47
CHD3-216ENST00000573936 ZMYM2Q9UBW7 1377 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 LPXNO60711 386 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 OFD1O75665 1012 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 GCNT3O95395 438 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 PIGRP01833 764 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 MCF2P10911 925 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 BMPR1AP36894 532 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 LIG4P49917 911 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 KYAT1Q16773 422 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 NOMO2Q5JPE7 1267 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 CLLU1OSQ5K130 101 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 MPZL3Q6UWV2 235 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 AGMOQ6ZNB7 445 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 CDR2LQ86X02 465 aaPredicted RBP12.08□□□□□ -0.48
CHD3-216ENST00000573936 MAP4K3Q8IVH8 894 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 TMEM192Q8IY95 271 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 LPPQ93052 612 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 PLVAPQ9BX97 442 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 PTPRHQ9HD43 1115 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 PARP2Q9UGN5 583 aa12.08□□□□□ -0.48
CHD3-216ENST00000573936 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
CHD3-216ENST00000573936 C5orf67F2Z3F1 127 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 CLDN3O15551 220 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 EDN1P05305 212 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 LAG3P18627 525 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 PROZP22891 400 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 CTNNB1P35222 781 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 GRM5P41594 1212 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.483e-8■■■□□ 14.8
CHD3-216ENST00000573936 GATMP50440 423 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 RNASELQ05823 741 aaKnown RBP12.07□□□□□ -0.48
CHD3-216ENST00000573936 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 MCL1Q07820 350 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 PSMD2Q13200 908 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 CUL4BQ13620 913 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 POSTNQ15063 836 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 EPC2Q52LR7 807 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 L1TD1Q5T7N2 865 aaKnown RBP12.07□□□□□ -0.48
CHD3-216ENST00000573936 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 SLFN12LQ6IEE8 588 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 CLEC17AQ6ZS10 378 aa12.07□□□□□ -0.48
CHD3-216ENST00000573936 FMR1NBQ8N0W7 255 aaPredicted RBP12.07□□□□□ -0.48
CHD3-216ENST00000573936 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms