RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DTHD1Q6ZMT9 781 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 KCTD17Q8N5Z5 321 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 HERC2P3Q9BVR0 1158 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 APOL6Q9BWW8 343 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 C2orf40Q9H1Z8 148 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 ARHGAP28Q9P2N2 729 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 CACNG4Q9UBN1 327 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 TRIOO75962 3097 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.11■□□□□ 0.65
SMG6-212ENST00000573153 KANK3Q6NY19 840 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 BRAPQ7Z569 592 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 ZBTB8OSQ8IWT0 167 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 KIFAP3Q92845 792 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 INTS4Q96HW7 963 aaKnown RBP19.11■□□□□ 0.65
SMG6-212ENST00000573153 PAAF1Q9BRP4 392 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 KLK14Q9P0G3 267 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
SMG6-212ENST00000573153 FAN1Q9Y2M0 1017 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 PRG3Q9Y2Y8 225 aaPredicted RBP19.11■□□□□ 0.65
SMG6-212ENST00000573153 PLXNA3P51805 1871 aa19.11■□□□□ 0.65
SMG6-212ENST00000573153 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 HIP1RO75146 1068 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 SOD2P04179 222 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 ALDH2P05091 517 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 CNPP09543 421 aaKnown RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 PDCP20941 246 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 NPTX2P47972 431 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 NCBP1Q09161 790 aaKnown RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 PRPF4BQ13523 1007 aaKnown RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 MAPK6Q16659 721 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 HERC4Q5GLZ8 1057 aaPredicted RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 KRT79Q5XKE5 535 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 RNF135Q8IUD6 432 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 DEPTORQ8TB45 409 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 CASP10Q92851 521 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 KLHL5Q96PQ7 755 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 APOL5Q9BWW9 433 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 PHF7Q9BWX1 381 aaPredicted RBP19.1■□□□□ 0.65
SMG6-212ENST00000573153 CHST7Q9NS84 486 aa19.1■□□□□ 0.65
SMG6-212ENST00000573153 TECTAO75443 2155 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 VWA3AA6NCI4 1184 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 N4BP3O15049 544 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 DCXO43602 365 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 RECQL4O94761 1208 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 HOXB8P17481 243 aaPredicted RBP19.09■□□□□ 0.65
SMG6-212ENST00000573153 IGFBP6P24592 240 aaPredicted RBP19.09■□□□□ 0.65
SMG6-212ENST00000573153 GUCY2CP25092 1073 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 CLCN4P51793 760 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 GRIK3Q13003 919 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 PPP2R5AQ15172 486 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 KIAA0319Q5VV43 1072 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 POP1Q99575 1024 aaKnown RBP19.09■□□□□ 0.65
SMG6-212ENST00000573153 GPR62Q9BZJ7 368 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 SNTG2Q9NY99 539 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 MUTYHQ9UIF7 546 aa19.09■□□□□ 0.65
SMG6-212ENST00000573153 PHLPP2Q6ZVD8 1323 aa19.08■□□□□ 0.65
SMG6-212ENST00000573153 SLC26A4O43511 780 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 PAPLNO95428 1278 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 BMP15O95972 392 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 PROZP22891 400 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 OR1G1P47890 313 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 PEX3P56589 373 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 GIT2Q14161 759 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 PTPAQ15257 358 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 ARSHQ5FYA8 562 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 TMEM31Q5JXX7 168 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 CD300LGQ6UXG3 332 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 C12orf76Q8N812 135 aaPredicted RBP19.08■□□□□ 0.64
SMG6-212ENST00000573153 CEP120Q8N960 986 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 SYT2Q8N9I0 419 aaPredicted RBP19.08■□□□□ 0.64
SMG6-212ENST00000573153 RABGGTAQ92696 567 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 TRIM6Q9C030 488 aaPredicted RBP19.08■□□□□ 0.64
SMG6-212ENST00000573153 ADAM7Q9H2U9 754 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 POMKQ9H5K3 350 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 RXFP1Q9HBX9 757 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 BLOC1S4Q9NUP1 217 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 DNM3Q9UQ16 869 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.64
SMG6-212ENST00000573153 SSBP05455 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMG6-212ENST00000573153 DSG1Q02413 1049 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 RESTQ13127 1097 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 XKR4Q5GH76 650 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 KCNN1Q92952 543 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 B3GALT6Q96L58 329 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 AK8Q96MA6 479 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 RPS6KC1Q96S38 1066 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 NTPCRQ9BSD7 190 aaKnown RBP19.07■□□□□ 0.64
SMG6-212ENST00000573153 CDT1Q9H211 546 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 TMEM134Q9H6X4 195 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 PARP2Q9UGN5 583 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 VWA8A3KMH1 1905 aa19.07■□□□□ 0.64
SMG6-212ENST00000573153 C2orf16Q68DN1 1984 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 SFI1A8K8P3 1242 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 WEE2P0C1S8 567 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 EFNA5P52803 228 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 FUT10Q6P4F1 479 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 FAM193BQ96PV7 902 aaPredicted RBP19.06■□□□□ 0.64
SMG6-212ENST00000573153 PPP1R10Q96QC0 940 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms